Analysis of interatomic Contacts of Structural Units in PDB entry:
5E75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E75 entry

There is 1 chain in PDB entry 5E75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 40GLU 546
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5E75. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 52Right-handed alpha
Helix 2
AA2
A
53 58Right-handed 310
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
66 72Right-handed alpha
Helix 5
AA5
A
84 90Right-handed alpha
Helix 6
AA6
A
96 123Right-handed alpha
Helix 7
AA7
A
129 153Right-handed alpha
Helix 8
AA8
A
163 170Right-handed alpha
Helix 9
AA9
A
177 196Right-handed alpha
Helix 10
AB1
A
206 223Right-handed alpha
Helix 11
AB2
A
231 249Right-handed alpha
Helix 12
AB3
A
256 266Right-handed 310
Helix 13
AB4
A
282 286Right-handed 310
Helix 14
AB5
A
289 294Right-handed alpha
Helix 15
AB6
A
296 300Right-handed 310
Helix 16
AB7
A
312 319Right-handed alpha
Helix 17
AB8
A
323 331Right-handed alpha
Helix 18
AB9
A
342 346Right-handed 310
Helix 19
AC1
A
387 400Right-handed alpha
Helix 20
AC2
A
408 421Right-handed alpha
Helix 21
AC3
A
430 443Right-handed alpha
Helix 22
AC4
A
447 459Right-handed alpha
Helix 23
AC5
A
459 469Right-handed alpha
Helix 24
AC6
A
503 506Right-handed 310
Helix 25
AC7
A
516 520Right-handed 310
Helix 26
AC8
A
525 532Right-handed alpha
Helix 27
AC9
A
533 537Right-handed 310
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There are 4 sheets in PDB entry 5E75. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
310 311anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
382 386anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
348 349anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 481first strand
Strand 2
A
487 492anti-parallel
Strand 3
A
499 501anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il