Analysis of interatomic Contacts of Structural Units in PDB entry:
5E76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E76 entry

There is 1 chain in PDB entry 5E76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 45GLU 546
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5E76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 52Right-handed alpha
Helix 2
AA2
A
53 58Right-handed 310
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
66 72Right-handed alpha
Helix 5
AA5
A
85 90Right-handed alpha
Helix 6
AA6
A
96 120Right-handed alpha
Helix 7
AA7
A
130 153Right-handed alpha
Helix 8
AA8
A
177 196Right-handed alpha
Helix 9
AA9
A
206 224Right-handed alpha
Helix 10
AB1
A
231 249Right-handed alpha
Helix 11
AB2
A
256 266Right-handed 310
Helix 12
AB3
A
289 294Right-handed alpha
Helix 13
AB4
A
296 300Right-handed 310
Helix 14
AB5
A
312 318Right-handed alpha
Helix 15
AB6
A
323 331Right-handed alpha
Helix 16
AB7
A
342 346Right-handed 310
Helix 17
AB8
A
387 400Right-handed alpha
Helix 18
AB9
A
408 421Right-handed alpha
Helix 19
AC1
A
430 443Right-handed alpha
Helix 20
AC2
A
447 459Right-handed alpha
Helix 21
AC3
A
459 468Right-handed alpha
Helix 22
AC4
A
503 506Right-handed 310
Helix 23
AC5
A
516 520Right-handed 310
Helix 24
AC6
A
525 532Right-handed alpha
Helix 25
AC7
A
533 537Right-handed 310
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There are 4 sheets in PDB entry 5E76. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 79first strand
Strand 2
A
310 311anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
382 386anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
348 349anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 481first strand
Strand 2
A
487 492anti-parallel
Strand 3
A
499 501anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il