Analysis of interatomic Contacts of Structural Units in PDB entry:
5E7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E7D entry

There are 4 chains in PDB entry 5E7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 621LEU 731
B
 LYS 621LEU 731
C
 LYS 621LEU 731
D
 LYS 621LEU 731
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5E7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
624 640Right-handed alpha
Helix 2
AA2
A
647 653Right-handed 310
Helix 3
AA3
A
661 668Right-handed alpha
Helix 4
AA4
A
673 683Right-handed alpha
Helix 5
AA5
A
688 707Right-handed alpha
Helix 6
AA6
A
711 731Right-handed alpha
Helix 7
AA7
B
624 640Right-handed alpha
Helix 8
AA8
B
647 653Right-handed 310
Helix 9
AA9
B
663 668Right-handed alpha
Helix 10
AB1
B
673 683Right-handed alpha
Helix 11
AB2
B
688 707Right-handed alpha
Helix 12
AB3
B
711 730Right-handed alpha
Helix 13
AB4
C
624 640Right-handed alpha
Helix 14
AB5
C
647 653Right-handed 310
Helix 15
AB6
C
661 668Right-handed alpha
Helix 16
AB7
C
673 683Right-handed alpha
Helix 17
AB8
C
688 707Right-handed alpha
Helix 18
AB9
C
711 731Right-handed alpha
Helix 19
AC1
D
624 640Right-handed alpha
Helix 20
AC2
D
647 653Right-handed 310
Helix 21
AC3
D
661 668Right-handed alpha
Helix 22
AC4
D
673 683Right-handed alpha
Helix 23
AC5
D
688 707Right-handed alpha
Helix 24
AC6
D
711 731Right-handed alpha
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There are no sheets in PDB entry 5E7D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il