Analysis of interatomic Contacts of Structural Units in PDB entry:
5E7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E7L entry

There is 1 chain in PDB entry 5E7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 607LYS 911
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 5E7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
737 742Right-handed alpha
Helix 2
AA2
A
859 863Right-handed 310
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There are 9 sheets in PDB entry 5E7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 619first strand
Strand 2
A
626 631anti-parallel
Strand 3
A
671 675anti-parallel
Strand 4
A
659 661anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
656 657first strand
Strand 2
A
642 648anti-parallel
Strand 3
A
682 691anti-parallel
Strand 4
A
694 695anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
665 666first strand
Strand 2
A
642 648anti-parallel
Strand 3
A
682 691anti-parallel
Strand 4
A
705 706anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 721first strand
Strand 2
A
728 734anti-parallel
Strand 3
A
772 776anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
761 766first strand
Strand 2
A
747 754anti-parallel
Strand 3
A
785 794anti-parallel
Strand 4
A
797 801anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
761 766first strand
Strand 2
A
747 754anti-parallel
Strand 3
A
785 794anti-parallel
Strand 4
A
805 808anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
821 825first strand
Strand 2
A
831 835anti-parallel
Strand 3
A
874 877anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
864 867first strand
Strand 2
A
848 855anti-parallel
Strand 3
A
885 894anti-parallel
Strand 4
A
897 898anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
864 867first strand
Strand 2
A
848 855anti-parallel
Strand 3
A
885 894anti-parallel
Strand 4
A
905 908anti-parallel
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