Analysis of interatomic Contacts of Structural Units in PDB entry:
5E7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E7P entry

There are 2 chains in PDB entry 5E7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 17LYS 744
B
 PRO 18TYR 688
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 5E7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 51Right-handed alpha
Helix 2
AA2
A
85 93Right-handed alpha
Helix 3
AA3
A
118 125Right-handed alpha
Helix 4
AA4
A
126 134Right-handed alpha
Helix 5
AA5
A
160 170Right-handed alpha
Helix 6
AA6
A
227 233Right-handed alpha
Helix 7
AA7
A
236 250Right-handed alpha
Helix 8
AA8
A
251 259Right-handed alpha
Helix 9
AA9
A
275 284Right-handed alpha
Helix 10
AB1
A
294 300Right-handed alpha
Helix 11
AB2
A
301 320Right-handed alpha
Helix 12
AB3
A
343 357Right-handed alpha
Helix 13
AB4
A
369 373Right-handed 310
Helix 14
AB5
A
393 405Right-handed alpha
Helix 15
AB6
A
414 421Right-handed alpha
Helix 16
AB7
A
426 449Right-handed alpha
Helix 17
AB8
A
455 463Right-handed alpha
Helix 18
AB9
A
468 472Right-handed 310
Helix 19
AC1
A
483 487Right-handed 310
Helix 20
AC2
A
490 501Right-handed alpha
Helix 21
AC3
A
501 507Right-handed alpha
Helix 22
AC4
A
507 514Right-handed alpha
Helix 23
AC5
A
533 540Right-handed alpha
Helix 24
AC6
A
552 558Right-handed alpha
Helix 25
AC7
A
562 577Right-handed alpha
Helix 26
AC8
A
586 591Right-handed alpha
Helix 27
AC9
A
601 618Right-handed alpha
Helix 28
AD1
A
631 635Right-handed 310
Helix 29
AD2
A
636 641Right-handed 310
Helix 30
AD3
A
655 667Right-handed alpha
Helix 31
AD4
A
677 685Right-handed alpha
Helix 32
AD5
A
689 708Right-handed alpha
Helix 33
AD6
A
715 726Right-handed alpha
Helix 34
AD7
A
731 740Right-handed alpha
Helix 35
AD8
B
31 35Right-handed 310
Helix 36
AD9
B
43 51Right-handed alpha
Helix 37
AE1
B
85 93Right-handed alpha
Helix 38
AE2
B
118 125Right-handed alpha
Helix 39
AE3
B
126 134Right-handed alpha
Helix 40
AE4
B
160 169Right-handed alpha
Helix 41
AE5
B
227 233Right-handed alpha
Helix 42
AE6
B
236 250Right-handed alpha
Helix 43
AE7
B
251 258Right-handed alpha
Helix 44
AE8
B
275 284Right-handed alpha
Helix 45
AE9
B
294 300Right-handed alpha
Helix 46
AF1
B
301 320Right-handed alpha
Helix 47
AF2
B
327 331Right-handed 310
Helix 48
AF3
B
342 357Right-handed alpha
Helix 49
AF4
B
369 373Right-handed 310
Helix 50
AF5
B
393 405Right-handed alpha
Helix 51
AF6
B
414 421Right-handed alpha
Helix 52
AF7
B
426 449Right-handed alpha
Helix 53
AF8
B
455 463Right-handed alpha
Helix 54
AF9
B
468 472Right-handed 310
Helix 55
AG1
B
483 487Right-handed 310
Helix 56
AG2
B
490 501Right-handed alpha
Helix 57
AG3
B
501 507Right-handed alpha
Helix 58
AG4
B
507 514Right-handed alpha
Helix 59
AG5
B
531 540Right-handed alpha
Helix 60
AG6
B
552 556Right-handed alpha
Helix 61
AG7
B
562 578Right-handed alpha
Helix 62
AG8
B
586 591Right-handed alpha
Helix 63
AG9
B
602 618Right-handed alpha
Helix 64
AH1
B
631 635Right-handed 310
Helix 65
AH2
B
636 641Right-handed 310
Helix 66
AH3
B
655 667Right-handed alpha
Helix 67
AH4
B
677 685Right-handed alpha
Helix 68
AH5
B
689 708Right-handed alpha
Helix 69
AH6
B
715 726Right-handed alpha
Helix 70
AH7
B
731 740Right-handed alpha
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There are 10 sheets in PDB entry 5E7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 28first strand
Strand 2
A
81 84parallel
Strand 3
A
39 42anti-parallel
Strand 4
A
65 72parallel
Strand 5
A
57 61anti-parallel
Strand 6
A
98 104anti-parallel
Strand 7
A
22 28anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
188 190parallel
Strand 3
A
138 140anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 146first strand
Strand 2
A
177 184anti-parallel
Strand 3
A
112 116anti-parallel
Strand 4
A
196 199parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
289 293anti-parallel
Strand 3
A
321 326parallel
Strand 4
A
361 366parallel
Strand 5
A
265 269parallel
Strand 6
A
385 388parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 551first strand
Strand 2
A
580 585parallel
Strand 3
A
623 629parallel
Strand 4
A
521 525parallel
Strand 5
A
645 650parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 28first strand
Strand 2
B
81 84parallel
Strand 3
B
39 42anti-parallel
Strand 4
B
65 72parallel
Strand 5
B
57 61anti-parallel
Strand 6
B
98 104anti-parallel
Strand 7
B
22 28anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
188 190parallel
Strand 3
B
138 140anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 146first strand
Strand 2
B
177 184anti-parallel
Strand 3
B
112 116anti-parallel
Strand 4
B
196 198parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 218first strand
Strand 2
B
289 293anti-parallel
Strand 3
B
321 326parallel
Strand 4
B
361 366parallel
Strand 5
B
264 269parallel
Strand 6
B
385 388parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 551first strand
Strand 2
B
580 585parallel
Strand 3
B
623 629parallel
Strand 4
B
522 525parallel
Strand 5
B
647 650parallel
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