Analysis of interatomic Contacts of Structural Units in PDB entry:
5E7S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5E7S entry

There are 12 chains in PDB entry 5E7S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 492	VAL 779
B	GLY 492	VAL 779
C	GLY 492	PRO 778
D	GLY 492	VAL 780
E	TYR 493	VAL 780
F	GLY 492	PRO 778
G	PRO 491	VAL 779
H	GLY 492	PRO 778
I	GLY 492	PRO 778
J	GLY 492	VAL 780
K	GLY 492	VAL 779
L	GLY 492	VAL 780

There are166 helices in PDB entry 5E7S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	494	505	Right-handed alpha
Helix 2	AA2	A	505	514	Right-handed alpha
Helix 3	AA3	A	523	535	Right-handed alpha
Helix 4	AA4	A	540	561	Right-handed alpha
Helix 5	AA5	A	573	579	Right-handed alpha
Helix 6	AA6	A	630	646	Right-handed alpha
Helix 7	AA7	A	647	652	Right-handed alpha
Helix 8	AA8	A	656	659	Right-handed 310
Helix 9	AA9	A	679	693	Right-handed alpha
Helix 10	AB1	A	717	729	Right-handed alpha
Helix 11	AB2	A	738	746	Right-handed 310
Helix 12	AB3	A	747	752	Right-handed alpha
Helix 13	AB4	A	761	770	Right-handed alpha
Helix 14	AB5	B	494	505	Right-handed alpha
Helix 15	AB6	B	505	515	Right-handed alpha
Helix 16	AB7	B	523	535	Right-handed alpha
Helix 17	AB8	B	542	561	Right-handed alpha
Helix 18	AB9	B	570	572	Right-handed 310
Helix 19	AC1	B	573	579	Right-handed alpha
Helix 20	AC2	B	630	646	Right-handed alpha
Helix 21	AC3	B	647	652	Right-handed alpha
Helix 22	AC4	B	656	660	Right-handed alpha
Helix 23	AC5	B	679	693	Right-handed alpha
Helix 24	AC6	B	717	728	Right-handed alpha
Helix 25	AC7	B	738	746	Right-handed 310
Helix 26	AC8	B	748	754	Right-handed alpha
Helix 27	AC9	B	761	770	Right-handed alpha
Helix 28	AD1	C	494	505	Right-handed alpha
Helix 29	AD2	C	505	514	Right-handed alpha
Helix 30	AD3	C	523	535	Right-handed alpha
Helix 31	AD4	C	540	561	Right-handed alpha
Helix 32	AD5	C	570	572	Right-handed 310
Helix 33	AD6	C	573	579	Right-handed alpha
Helix 34	AD7	C	630	646	Right-handed alpha
Helix 35	AD8	C	656	660	Right-handed alpha
Helix 36	AD9	C	679	693	Right-handed alpha
Helix 37	AE1	C	717	729	Right-handed alpha
Helix 38	AE2	C	738	746	Right-handed 310
Helix 39	AE3	C	747	753	Right-handed alpha
Helix 40	AE4	C	761	770	Right-handed alpha
Helix 41	AE5	D	494	505	Right-handed alpha
Helix 42	AE6	D	505	514	Right-handed alpha
Helix 43	AE7	D	523	535	Right-handed alpha
Helix 44	AE8	D	540	561	Right-handed alpha
Helix 45	AE9	D	570	572	Right-handed 310
Helix 46	AF1	D	573	578	Right-handed alpha
Helix 47	AF2	D	630	647	Right-handed alpha
Helix 48	AF3	D	648	652	Right-handed 310
Helix 49	AF4	D	679	693	Right-handed alpha
Helix 50	AF5	D	717	728	Right-handed alpha
Helix 51	AF6	D	738	746	Right-handed 310
Helix 52	AF7	D	747	754	Right-handed alpha
Helix 53	AF8	D	761	770	Right-handed alpha
Helix 54	AF9	E	494	505	Right-handed alpha
Helix 55	AG1	E	505	515	Right-handed alpha
Helix 56	AG2	E	523	535	Right-handed alpha
Helix 57	AG3	E	540	561	Right-handed alpha
Helix 58	AG4	E	570	572	Right-handed 310
Helix 59	AG5	E	573	579	Right-handed alpha
Helix 60	AG6	E	584	591	Right-handed 310
Helix 61	AG7	E	630	647	Right-handed alpha
Helix 62	AG8	E	647	652	Right-handed alpha
Helix 63	AG9	E	656	660	Right-handed alpha
Helix 64	AH1	E	676	678	Right-handed 310
Helix 65	AH2	E	679	693	Right-handed alpha
Helix 66	AH3	E	717	727	Right-handed alpha
Helix 67	AH4	E	738	745	Right-handed 310
Helix 68	AH5	E	747	754	Right-handed alpha
Helix 69	AH6	E	761	770	Right-handed alpha
Helix 70	AH7	F	494	505	Right-handed alpha
Helix 71	AH8	F	505	514	Right-handed alpha
Helix 72	AH9	F	523	535	Right-handed alpha
Helix 73	AI1	F	540	561	Right-handed alpha
Helix 74	AI2	F	573	579	Right-handed alpha
Helix 75	AI3	F	587	591	Right-handed 310
Helix 76	AI4	F	630	647	Right-handed alpha
Helix 77	AI5	F	656	660	Right-handed alpha
Helix 78	AI6	F	679	693	Right-handed alpha
Helix 79	AI7	F	717	729	Right-handed alpha
Helix 80	AI8	F	738	740	Right-handed 310
Helix 81	AI9	F	741	746	Right-handed alpha
Helix 82	AJ1	F	747	752	Right-handed alpha
Helix 83	AJ2	F	761	770	Right-handed alpha
Helix 84	AJ3	G	494	505	Right-handed alpha
Helix 85	AJ4	G	505	514	Right-handed alpha
Helix 86	AJ5	G	523	535	Right-handed alpha
Helix 87	AJ6	G	540	561	Right-handed alpha
Helix 88	AJ7	G	570	572	Right-handed 310
Helix 89	AJ8	G	573	579	Right-handed alpha
Helix 90	AJ9	G	630	646	Right-handed alpha
Helix 91	AK1	G	647	652	Right-handed alpha
Helix 92	AK2	G	656	660	Right-handed alpha
Helix 93	AK3	G	679	693	Right-handed alpha
Helix 94	AK4	G	717	729	Right-handed alpha
Helix 95	AK5	G	738	746	Right-handed 310
Helix 96	AK6	G	747	754	Right-handed alpha
Helix 97	AK7	G	761	770	Right-handed alpha
Helix 98	AK8	H	494	505	Right-handed alpha
Helix 99	AK9	H	505	515	Right-handed alpha
Helix 100	AL1	H	523	535	Right-handed alpha
Helix 101	AL2	H	540	561	Right-handed alpha
Helix 102	AL3	H	573	579	Right-handed alpha
Helix 103	AL4	H	587	591	Right-handed 310
Helix 104	AL5	H	630	646	Right-handed alpha
Helix 105	AL6	H	648	652	Right-handed 310
Helix 106	AL7	H	679	693	Right-handed alpha
Helix 107	AL8	H	717	728	Right-handed alpha
Helix 108	AL9	H	738	744	Right-handed 310
Helix 109	AM1	H	747	754	Right-handed alpha
Helix 110	AM2	H	761	770	Right-handed alpha
Helix 111	AM3	I	494	505	Right-handed alpha
Helix 112	AM4	I	505	515	Right-handed alpha
Helix 113	AM5	I	523	535	Right-handed alpha
Helix 114	AM6	I	540	561	Right-handed alpha
Helix 115	AM7	I	570	573	Right-handed 310
Helix 116	AM8	I	574	579	Right-handed alpha
Helix 117	AM9	I	630	646	Right-handed alpha
Helix 118	AN1	I	679	693	Right-handed alpha
Helix 119	AN2	I	717	729	Right-handed alpha
Helix 120	AN3	I	738	745	Right-handed 310
Helix 121	AN4	I	747	753	Right-handed alpha
Helix 122	AN5	I	761	770	Right-handed alpha
Helix 123	AN6	J	495	505	Right-handed alpha
Helix 124	AN7	J	505	514	Right-handed alpha
Helix 125	AN8	J	523	535	Right-handed alpha
Helix 126	AN9	J	540	560	Right-handed alpha
Helix 127	AO1	J	570	572	Right-handed 310
Helix 128	AO2	J	573	579	Right-handed alpha
Helix 129	AO3	J	587	591	Right-handed 310
Helix 130	AO4	J	630	647	Right-handed alpha
Helix 131	AO5	J	647	652	Right-handed alpha
Helix 132	AO6	J	656	660	Right-handed alpha
Helix 133	AO7	J	679	693	Right-handed alpha
Helix 134	AO8	J	717	729	Right-handed alpha
Helix 135	AO9	J	738	745	Right-handed 310
Helix 136	AP1	J	747	752	Right-handed alpha
Helix 137	AP2	J	761	770	Right-handed alpha
Helix 138	AP3	K	494	505	Right-handed alpha
Helix 139	AP4	K	505	514	Right-handed alpha
Helix 140	AP5	K	523	534	Right-handed alpha
Helix 141	AP6	K	540	561	Right-handed alpha
Helix 142	AP7	K	573	579	Right-handed alpha
Helix 143	AP8	K	587	591	Right-handed 310
Helix 144	AP9	K	630	647	Right-handed alpha
Helix 145	AQ1	K	648	652	Right-handed 310
Helix 146	AQ2	K	656	660	Right-handed alpha
Helix 147	AQ3	K	679	693	Right-handed alpha
Helix 148	AQ4	K	717	728	Right-handed alpha
Helix 149	AQ5	K	738	745	Right-handed 310
Helix 150	AQ6	K	747	754	Right-handed alpha
Helix 151	AQ7	K	761	770	Right-handed alpha
Helix 152	AQ8	L	494	505	Right-handed alpha
Helix 153	AQ9	L	505	510	Right-handed alpha
Helix 154	AR1	L	523	535	Right-handed alpha
Helix 155	AR2	L	540	555	Right-handed alpha
Helix 156	AR3	L	570	572	Right-handed 310
Helix 157	AR4	L	573	579	Right-handed alpha
Helix 158	AR5	L	587	591	Right-handed 310
Helix 159	AR6	L	630	646	Right-handed alpha
Helix 160	AR7	L	647	652	Right-handed alpha
Helix 161	AR8	L	656	660	Right-handed alpha
Helix 162	AR9	L	679	693	Right-handed alpha
Helix 163	AS1	L	717	729	Right-handed alpha
Helix 164	AS2	L	738	746	Right-handed 310
Helix 165	AS3	L	748	753	Right-handed alpha
Helix 166	AS4	L	761	770	Right-handed alpha

There are 32 sheets in PDB entry 5E7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	520	522	first strand
Strand 2	A	567	569	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	626	first strand
Strand 2	A	661	666	parallel
Strand 3	A	608	618	anti-parallel
Strand 4	A	596	601	anti-parallel
Strand 5	A	700	702	parallel
Strand 6	A	732	736	parallel
Strand 7	A	755	759	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	520	522	first strand
Strand 2	B	567	569	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	626	first strand
Strand 2	B	661	666	parallel
Strand 3	B	606	618	anti-parallel
Strand 4	B	596	603	anti-parallel
Strand 5	B	700	702	parallel
Strand 6	B	732	736	parallel
Strand 7	B	755	759	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	705	706	first strand
Strand 2	B	712	713	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	520	522	first strand
Strand 2	C	567	569	parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	623	626	first strand
Strand 2	C	661	666	parallel
Strand 3	C	608	618	anti-parallel
Strand 4	C	596	601	anti-parallel
Strand 5	C	700	702	parallel
Strand 6	C	732	736	parallel
Strand 7	C	755	759	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	705	706	first strand
Strand 2	C	712	713	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	520	522	first strand
Strand 2	D	567	569	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	623	626	first strand
Strand 2	D	661	666	parallel
Strand 3	D	606	618	anti-parallel
Strand 4	D	596	603	anti-parallel
Strand 5	D	701	702	parallel
Strand 6	D	732	736	parallel
Strand 7	D	755	759	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	705	706	first strand
Strand 2	D	712	713	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	520	522	first strand
Strand 2	E	567	569	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	623	626	first strand
Strand 2	E	661	666	parallel
Strand 3	E	606	618	anti-parallel
Strand 4	E	596	603	anti-parallel
Strand 5	E	701	702	parallel
Strand 6	E	732	736	parallel
Strand 7	E	755	759	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	705	706	first strand
Strand 2	E	712	713	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	520	522	first strand
Strand 2	F	567	569	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	623	626	first strand
Strand 2	F	661	666	parallel
Strand 3	F	607	618	anti-parallel
Strand 4	F	596	602	anti-parallel
Strand 5	F	701	702	parallel
Strand 6	F	732	736	parallel
Strand 7	F	755	759	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	520	522	first strand
Strand 2	G	567	569	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	623	626	first strand
Strand 2	G	661	666	parallel
Strand 3	G	609	618	anti-parallel
Strand 4	G	596	600	anti-parallel
Strand 5	G	701	702	parallel
Strand 6	G	732	736	parallel
Strand 7	G	755	759	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	520	522	first strand
Strand 2	H	567	569	parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	623	626	first strand
Strand 2	H	661	666	parallel
Strand 3	H	608	618	anti-parallel
Strand 4	H	596	601	anti-parallel
Strand 5	H	700	702	parallel
Strand 6	H	732	736	parallel
Strand 7	H	755	759	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	705	706	first strand
Strand 2	H	712	713	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	520	522	first strand
Strand 2	I	567	569	parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	623	626	first strand
Strand 2	I	661	666	parallel
Strand 3	I	606	618	anti-parallel
Strand 4	I	596	603	anti-parallel
Strand 5	I	700	702	parallel
Strand 6	I	732	736	parallel
Strand 7	I	755	759	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	520	522	first strand
Strand 2	J	567	569	parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	623	626	first strand
Strand 2	J	661	666	parallel
Strand 3	J	611	618	anti-parallel
Strand 4	J	596	599	anti-parallel
Strand 5	J	701	702	parallel
Strand 6	J	732	736	parallel
Strand 7	J	755	759	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	601	603	first strand
Strand 2	J	606	608	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	705	706	first strand
Strand 2	J	712	713	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	520	522	first strand
Strand 2	K	567	569	parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	623	626	first strand
Strand 2	K	661	666	parallel
Strand 3	K	606	618	anti-parallel
Strand 4	K	596	603	anti-parallel
Strand 5	K	701	702	parallel
Strand 6	K	732	736	parallel
Strand 7	K	755	759	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	705	706	first strand
Strand 2	K	712	713	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	623	626	first strand
Strand 2	L	661	666	parallel
Strand 3	L	606	618	anti-parallel
Strand 4	L	596	603	anti-parallel
Strand 5	L	700	702	parallel
Strand 6	L	732	736	parallel
Strand 7	L	755	759	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	705	706	first strand
Strand 2	L	712	713	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5E7S

Analysis of interatomic Contacts of Structural Units in PDB entry:
5E7S