Analysis of interatomic Contacts of Structural Units in PDB entry:
5E9G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5E9G entry

There are 4 chains in PDB entry 5E9G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5THR 528
B
 ASN 5GLY 529
C
 ASN 5VAL 527
D
 ASN 5GLY 529
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 5E9G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 32Right-handed alpha
Helix 2
AA2
A
33 37Right-handed 310
Helix 3
AA3
A
44 50Right-handed alpha
Helix 4
AA4
A
59 79Right-handed alpha
Helix 5
AA5
A
89 97Right-handed alpha
Helix 6
AA6
A
106 114Right-handed alpha
Helix 7
AA7
A
130 157Right-handed alpha
Helix 8
AA8
A
158 165Right-handed 310
Helix 9
AA9
A
184 199Right-handed alpha
Helix 10
AB1
A
225 244Right-handed alpha
Helix 11
AB2
A
266 270Right-handed 310
Helix 12
AB3
A
283 293Right-handed alpha
Helix 13
AB4
A
298 313Right-handed alpha
Helix 14
AB5
A
316 326Right-handed alpha
Helix 15
AB6
A
333 346Right-handed alpha
Helix 16
AB7
A
349 360Right-handed alpha
Helix 17
AB8
A
384 396Right-handed alpha
Helix 18
AB9
A
397 399Right-handed 310
Helix 19
AC1
A
410 423Right-handed alpha
Helix 20
AC2
A
439 444Right-handed alpha
Helix 21
AC3
A
445 459Right-handed alpha
Helix 22
AC4
A
468 489Right-handed alpha
Helix 23
AC5
A
489 497Right-handed alpha
Helix 24
AC6
A
497 505Right-handed alpha
Helix 25
AC7
A
506 509Right-handed 310
Helix 26
AC8
A
510 515Right-handed alpha
Helix 27
AC9
A
516 527Right-handed alpha
Helix 28
AD1
B
12 14Right-handed 310
Helix 29
AD2
B
15 31Right-handed alpha
Helix 30
AD3
B
32 37Right-handed 310
Helix 31
AD4
B
44 50Right-handed alpha
Helix 32
AD5
B
59 79Right-handed alpha
Helix 33
AD6
B
89 97Right-handed alpha
Helix 34
AD7
B
106 114Right-handed alpha
Helix 35
AD8
B
130 157Right-handed alpha
Helix 36
AD9
B
158 165Right-handed 310
Helix 37
AE1
B
184 199Right-handed alpha
Helix 38
AE2
B
225 243Right-handed alpha
Helix 39
AE3
B
266 273Right-handed 310
Helix 40
AE4
B
283 293Right-handed alpha
Helix 41
AE5
B
298 313Right-handed alpha
Helix 42
AE6
B
316 328Right-handed alpha
Helix 43
AE7
B
333 346Right-handed alpha
Helix 44
AE8
B
349 360Right-handed alpha
Helix 45
AE9
B
384 396Right-handed alpha
Helix 46
AF1
B
397 399Right-handed 310
Helix 47
AF2
B
410 423Right-handed alpha
Helix 48
AF3
B
439 444Right-handed alpha
Helix 49
AF4
B
445 458Right-handed alpha
Helix 50
AF5
B
468 489Right-handed alpha
Helix 51
AF6
B
489 497Right-handed alpha
Helix 52
AF7
B
497 505Right-handed alpha
Helix 53
AF8
B
506 509Right-handed 310
Helix 54
AF9
B
510 515Right-handed alpha
Helix 55
AG1
B
516 529Right-handed alpha
Helix 56
AG2
C
12 32Right-handed alpha
Helix 57
AG3
C
33 37Right-handed 310
Helix 58
AG4
C
44 50Right-handed alpha
Helix 59
AG5
C
59 78Right-handed alpha
Helix 60
AG6
C
89 97Right-handed alpha
Helix 61
AG7
C
106 114Right-handed alpha
Helix 62
AG8
C
130 157Right-handed alpha
Helix 63
AG9
C
158 163Right-handed alpha
Helix 64
AH1
C
184 199Right-handed alpha
Helix 65
AH2
C
209 213Right-handed 310
Helix 66
AH3
C
225 244Right-handed alpha
Helix 67
AH4
C
266 270Right-handed 310
Helix 68
AH5
C
283 290Right-handed alpha
Helix 69
AH6
C
305 313Right-handed alpha
Helix 70
AH7
C
316 326Right-handed alpha
Helix 71
AH8
C
340 345Right-handed alpha
Helix 72
AH9
C
349 360Right-handed alpha
Helix 73
AI1
C
384 396Right-handed alpha
Helix 74
AI2
C
397 399Right-handed 310
Helix 75
AI3
C
410 423Right-handed alpha
Helix 76
AI4
C
439 444Right-handed alpha
Helix 77
AI5
C
445 458Right-handed alpha
Helix 78
AI6
C
468 489Right-handed alpha
Helix 79
AI7
C
489 497Right-handed alpha
Helix 80
AI8
C
497 505Right-handed alpha
Helix 81
AI9
C
506 509Right-handed 310
Helix 82
AJ1
C
510 516Right-handed alpha
Helix 83
AJ2
C
516 527Right-handed alpha
Helix 84
AJ3
D
15 32Right-handed alpha
Helix 85
AJ4
D
33 37Right-handed 310
Helix 86
AJ5
D
44 50Right-handed alpha
Helix 87
AJ6
D
59 78Right-handed alpha
Helix 88
AJ7
D
89 97Right-handed alpha
Helix 89
AJ8
D
106 114Right-handed alpha
Helix 90
AJ9
D
130 157Right-handed alpha
Helix 91
AK1
D
158 165Right-handed 310
Helix 92
AK2
D
184 199Right-handed alpha
Helix 93
AK3
D
225 244Right-handed alpha
Helix 94
AK4
D
266 271Right-handed alpha
Helix 95
AK5
D
283 288Right-handed alpha
Helix 96
AK6
D
308 313Right-handed alpha
Helix 97
AK7
D
317 322Right-handed alpha
Helix 98
AK8
D
341 346Right-handed alpha
Helix 99
AK9
D
349 359Right-handed alpha
Helix 100
AL1
D
384 396Right-handed alpha
Helix 101
AL2
D
397 399Right-handed 310
Helix 102
AL3
D
410 423Right-handed alpha
Helix 103
AL4
D
445 459Right-handed alpha
Helix 104
AL5
D
468 489Right-handed alpha
Helix 105
AL6
D
489 497Right-handed alpha
Helix 106
AL7
D
497 505Right-handed alpha
Helix 107
AL8
D
506 509Right-handed 310
Helix 108
AL9
D
510 515Right-handed alpha
Helix 109
AM1
D
516 529Right-handed alpha
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There are 9 sheets in PDB entry 5E9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 85first strand
Strand 2
A
461 466parallel
Strand 3
A
430 433parallel
Strand 4
A
401 404parallel
Strand 5
A
248 253parallel
Strand 6
A
202 206parallel
Strand 7
A
174 177parallel
Strand 8
A
103 105parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
260 261parallel
Strand 3
A
379 380anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
461 466parallel
Strand 3
B
430 433parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
174 177parallel
Strand 3
B
202 206parallel
Strand 4
B
248 253parallel
Strand 5
B
401 404parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
260 261parallel
Strand 3
B
379 380anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 85first strand
Strand 2
C
461 466parallel
Strand 3
C
430 433parallel
Strand 4
C
401 404parallel
Strand 5
C
248 253parallel
Strand 6
C
202 206parallel
Strand 7
C
174 177parallel
Strand 8
C
103 105parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 223first strand
Strand 2
C
260 261parallel
Strand 3
C
379 380anti-parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 85first strand
Strand 2
D
461 466parallel
Strand 3
D
430 433parallel
Strand 4
D
401 404parallel
Strand 5
D
248 253parallel
Strand 6
D
202 206parallel
Strand 7
D
174 177parallel
Strand 8
D
103 105parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
222 223first strand
Strand 2
D
260 261parallel
Strand 3
D
379 380anti-parallel
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