Analysis of interatomic Contacts of Structural Units in PDB entry:
5EAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EAC entry

There is 1 chain in PDB entry 5EAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 6HIS 535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5EAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 23Right-handed alpha
Helix 2
AA2
A
26 50Right-handed alpha
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
75 88Right-handed alpha
Helix 5
AA5
A
105 114Right-handed alpha
Helix 6
AA6
A
122 135Right-handed alpha
Helix 7
AA7
A
143 156Right-handed alpha
Helix 8
AA8
A
159 181Right-handed alpha
Helix 9
AA9
A
196 213Right-handed alpha
Helix 10
AB1
A
214 222Right-handed alpha
Helix 11
AB2
A
225 235Right-handed alpha
Helix 12
AB3
A
238 243Right-handed alpha
Helix 13
AB4
A
250 275Right-handed alpha
Helix 14
AB5
A
282 290Right-handed alpha
Helix 15
AB6
A
300 331Right-handed alpha
Helix 16
AB7
A
333 348Right-handed alpha
Helix 17
AB8
A
356 361Right-handed alpha
Helix 18
AB9
A
363 377Right-handed alpha
Helix 19
AC1
A
409 414Right-handed alpha
Helix 20
AC2
A
427 432Right-handed 310
Helix 21
AC3
A
465 469Right-handed 310
Helix 22
AC4
A
472 490Right-handed alpha
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There are 4 sheets in PDB entry 5EAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 95first strand
Strand 2
A
98 103anti-parallel
Strand 3
A
405 408parallel
Strand 4
A
383 387anti-parallel
Strand 5
A
120 121anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
518 523anti-parallel
Strand 3
A
491 494anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
399 400anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 446first strand
Strand 2
A
451 453anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il