Analysis of interatomic Contacts of Structural Units in PDB entry:
5EAI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5EAI entry

There are 5 chains in PDB entry 5EAI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 3	ARG 272
B	ARG 3	ARG 272
C	VAL 1	ARG 272
D	ARG 3	LYS 273
E	GLY 2	PHE 181

There are185 helices in PDB entry 5EAI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	32	Right-handed alpha
Helix 2	AA2	A	51	55	Right-handed 310
Helix 3	AA3	A	66	77	Right-handed alpha
Helix 4	AA4	A	81	94	Right-handed alpha
Helix 5	AA5	A	109	120	Right-handed alpha
Helix 6	AA6	A	131	135	Right-handed 310
Helix 7	AA7	A	151	156	Right-handed 310
Helix 8	AA8	A	163	173	Right-handed alpha
Helix 9	AA9	A	176	180	Right-handed 310
Helix 10	AB1	A	191	195	Right-handed 310
Helix 11	AB2	A	196	212	Right-handed alpha
Helix 12	AB3	A	213	217	Right-handed 310
Helix 13	AB4	A	224	228	Right-handed 310
Helix 14	AB5	A	231	235	Right-handed 310
Helix 15	AB6	A	239	248	Right-handed alpha
Helix 16	AB7	B	16	32	Right-handed alpha
Helix 17	AB8	B	51	55	Right-handed 310
Helix 18	AB9	B	66	77	Right-handed alpha
Helix 19	AC1	B	81	94	Right-handed alpha
Helix 20	AC2	B	109	120	Right-handed alpha
Helix 21	AC3	B	151	156	Right-handed 310
Helix 22	AC4	B	163	173	Right-handed alpha
Helix 23	AC5	B	176	180	Right-handed 310
Helix 24	AC6	B	196	212	Right-handed alpha
Helix 25	AC7	B	224	228	Right-handed 310
Helix 26	AC8	B	239	246	Right-handed alpha
Helix 27	AC9	C	16	32	Right-handed alpha
Helix 28	AD1	C	51	55	Right-handed 310
Helix 29	AD2	C	66	78	Right-handed alpha
Helix 30	AD3	C	81	94	Right-handed alpha
Helix 31	AD4	C	109	120	Right-handed alpha
Helix 32	AD5	C	131	135	Right-handed 310
Helix 33	AD6	C	151	156	Right-handed 310
Helix 34	AD7	C	163	173	Right-handed alpha
Helix 35	AD8	C	176	180	Right-handed 310
Helix 36	AD9	C	191	195	Right-handed 310
Helix 37	AE1	C	196	212	Right-handed alpha
Helix 38	AE2	C	224	228	Right-handed 310
Helix 39	AE3	C	231	235	Right-handed 310
Helix 40	AE4	C	239	247	Right-handed alpha
Helix 41	AE5	D	16	32	Right-handed alpha
Helix 42	AE6	D	51	55	Right-handed 310
Helix 43	AE7	D	66	78	Right-handed alpha
Helix 44	AE8	D	81	94	Right-handed alpha
Helix 45	AE9	D	109	120	Right-handed alpha
Helix 46	AF1	D	131	135	Right-handed 310
Helix 47	AF2	D	151	156	Right-handed 310
Helix 48	AF3	D	163	173	Right-handed alpha
Helix 49	AF4	D	176	180	Right-handed 310
Helix 50	AF5	D	191	195	Right-handed 310
Helix 51	AF6	D	196	212	Right-handed alpha
Helix 52	AF7	D	224	228	Right-handed 310
Helix 53	AF8	D	239	248	Right-handed alpha
Helix 54	AF9	E	16	32	Right-handed alpha
Helix 55	AG1	E	51	55	Right-handed 310
Helix 56	AG2	E	66	77	Right-handed alpha
Helix 57	AG3	E	81	94	Right-handed alpha
Helix 58	AG4	E	109	120	Right-handed alpha
Helix 59	AG5	E	151	156	Right-handed 310
Helix 60	AG6	E	163	173	Right-handed alpha
Helix 61	AG7	E	176	180	Right-handed 310
Helix 62	AG8	E	196	212	Right-handed alpha
Helix 63	AG9	E	224	228	Right-handed 310
Helix 64	AH1	E	239	247	Right-handed alpha
Helix 65	AH2	F	16	32	Right-handed alpha
Helix 66	AH3	F	51	55	Right-handed 310
Helix 67	AH4	F	66	78	Right-handed alpha
Helix 68	AH5	F	81	94	Right-handed alpha
Helix 69	AH6	F	109	120	Right-handed alpha
Helix 70	AH7	F	131	135	Right-handed 310
Helix 71	AH8	F	151	156	Right-handed 310
Helix 72	AH9	F	163	173	Right-handed alpha
Helix 73	AI1	F	176	180	Right-handed 310
Helix 74	AI2	F	196	212	Right-handed alpha
Helix 75	AI3	F	224	228	Right-handed 310
Helix 76	AI4	F	231	235	Right-handed 310
Helix 77	AI5	F	239	247	Right-handed alpha
Helix 78	AI6	G	16	32	Right-handed alpha
Helix 79	AI7	G	51	55	Right-handed 310
Helix 80	AI8	G	66	77	Right-handed alpha
Helix 81	AI9	G	81	94	Right-handed alpha
Helix 82	AJ1	G	109	120	Right-handed alpha
Helix 83	AJ2	G	121	126	Right-handed alpha
Helix 84	AJ3	G	131	135	Right-handed 310
Helix 85	AJ4	G	151	156	Right-handed 310
Helix 86	AJ5	G	163	173	Right-handed alpha
Helix 87	AJ6	G	176	180	Right-handed 310
Helix 88	AJ7	G	196	212	Right-handed alpha
Helix 89	AJ8	G	224	228	Right-handed 310
Helix 90	AJ9	G	239	247	Right-handed alpha
Helix 91	AK1	H	16	32	Right-handed alpha
Helix 92	AK2	H	51	55	Right-handed 310
Helix 93	AK3	H	66	78	Right-handed alpha
Helix 94	AK4	H	81	94	Right-handed alpha
Helix 95	AK5	H	109	120	Right-handed alpha
Helix 96	AK6	H	121	126	Right-handed alpha
Helix 97	AK7	H	131	135	Right-handed 310
Helix 98	AK8	H	151	156	Right-handed 310
Helix 99	AK9	H	163	173	Right-handed alpha
Helix 100	AL1	H	176	180	Right-handed 310
Helix 101	AL2	H	191	195	Right-handed 310
Helix 102	AL3	H	196	212	Right-handed alpha
Helix 103	AL4	H	224	228	Right-handed 310
Helix 104	AL5	H	231	235	Right-handed 310
Helix 105	AL6	H	239	246	Right-handed alpha
Helix 106	AL7	I	16	32	Right-handed alpha
Helix 107	AL8	I	51	55	Right-handed 310
Helix 108	AL9	I	66	78	Right-handed alpha
Helix 109	AM1	I	81	94	Right-handed alpha
Helix 110	AM2	I	109	120	Right-handed alpha
Helix 111	AM3	I	121	126	Right-handed alpha
Helix 112	AM4	I	131	135	Right-handed 310
Helix 113	AM5	I	151	156	Right-handed 310
Helix 114	AM6	I	163	173	Right-handed alpha
Helix 115	AM7	I	176	180	Right-handed 310
Helix 116	AM8	I	196	212	Right-handed alpha
Helix 117	AM9	I	224	228	Right-handed 310
Helix 118	AN1	I	239	247	Right-handed alpha
Helix 119	AN2	J	16	32	Right-handed alpha
Helix 120	AN3	J	51	55	Right-handed 310
Helix 121	AN4	J	66	77	Right-handed alpha
Helix 122	AN5	J	81	94	Right-handed alpha
Helix 123	AN6	J	109	120	Right-handed alpha
Helix 124	AN7	J	131	135	Right-handed 310
Helix 125	AN8	J	151	156	Right-handed 310
Helix 126	AN9	J	163	173	Right-handed alpha
Helix 127	AO1	J	176	180	Right-handed 310
Helix 128	AO2	J	191	195	Right-handed 310
Helix 129	AO3	J	196	212	Right-handed alpha
Helix 130	AO4	J	224	228	Right-handed 310
Helix 131	AO5	J	239	247	Right-handed alpha
Helix 132	AO6	K	16	32	Right-handed alpha
Helix 133	AO7	K	51	55	Right-handed 310
Helix 134	AO8	K	66	78	Right-handed alpha
Helix 135	AO9	K	81	94	Right-handed alpha
Helix 136	AP1	K	109	120	Right-handed alpha
Helix 137	AP2	K	121	126	Right-handed alpha
Helix 138	AP3	K	131	135	Right-handed 310
Helix 139	AP4	K	151	156	Right-handed 310
Helix 140	AP5	K	163	173	Right-handed alpha
Helix 141	AP6	K	176	180	Right-handed 310
Helix 142	AP7	K	191	195	Right-handed 310
Helix 143	AP8	K	196	212	Right-handed alpha
Helix 144	AP9	K	224	228	Right-handed 310
Helix 145	AQ1	K	239	247	Right-handed alpha
Helix 146	AQ2	L	16	32	Right-handed alpha
Helix 147	AQ3	L	51	55	Right-handed 310
Helix 148	AQ4	L	66	78	Right-handed alpha
Helix 149	AQ5	L	81	94	Right-handed alpha
Helix 150	AQ6	L	109	120	Right-handed alpha
Helix 151	AQ7	L	121	126	Right-handed alpha
Helix 152	AQ8	L	131	135	Right-handed 310
Helix 153	AQ9	L	151	156	Right-handed 310
Helix 154	AR1	L	163	173	Right-handed alpha
Helix 155	AR2	L	176	180	Right-handed 310
Helix 156	AR3	L	196	212	Right-handed alpha
Helix 157	AR4	L	224	228	Right-handed 310
Helix 158	AR5	L	231	235	Right-handed 310
Helix 159	AR6	L	239	248	Right-handed alpha
Helix 160	AR7	M	16	32	Right-handed alpha
Helix 161	AR8	M	51	55	Right-handed 310
Helix 162	AR9	M	66	78	Right-handed alpha
Helix 163	AS1	M	81	94	Right-handed alpha
Helix 164	AS2	M	109	120	Right-handed alpha
Helix 165	AS3	M	121	126	Right-handed alpha
Helix 166	AS4	M	131	135	Right-handed 310
Helix 167	AS5	M	151	156	Right-handed 310
Helix 168	AS6	M	163	173	Right-handed alpha
Helix 169	AS7	M	176	180	Right-handed 310
Helix 170	AS8	M	196	212	Right-handed alpha
Helix 171	AS9	M	224	228	Right-handed 310
Helix 172	AT1	M	239	246	Right-handed alpha
Helix 173	AT2	N	16	32	Right-handed alpha
Helix 174	AT3	N	51	55	Right-handed 310
Helix 175	AT4	N	66	77	Right-handed alpha
Helix 176	AT5	N	81	94	Right-handed alpha
Helix 177	AT6	N	109	120	Right-handed alpha
Helix 178	AT7	N	131	135	Right-handed 310
Helix 179	AT8	N	151	156	Right-handed 310
Helix 180	AT9	N	163	173	Right-handed alpha
Helix 181	AU1	N	176	180	Right-handed 310
Helix 182	AU2	N	196	212	Right-handed alpha
Helix 183	AU3	N	224	228	Right-handed 310
Helix 184	AU4	N	231	235	Right-handed 310
Helix 185	AU5	N	239	247	Right-handed alpha

There are 28 sheets in PDB entry 5EAI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	40	first strand
Strand 2	A	4	9	parallel
Strand 3	A	96	102	parallel
Strand 4	A	141	147	parallel
Strand 5	A	182	183	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	40	first strand
Strand 2	A	4	9	parallel
Strand 3	A	96	102	parallel
Strand 4	A	141	147	parallel
Strand 5	A	187	189	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	40	first strand
Strand 2	B	4	9	parallel
Strand 3	B	96	102	parallel
Strand 4	B	141	147	parallel
Strand 5	B	182	183	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	40	first strand
Strand 2	B	4	9	parallel
Strand 3	B	96	102	parallel
Strand 4	B	141	147	parallel
Strand 5	B	187	189	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	40	first strand
Strand 2	C	4	9	parallel
Strand 3	C	96	102	parallel
Strand 4	C	141	147	parallel
Strand 5	C	182	183	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	40	first strand
Strand 2	C	4	9	parallel
Strand 3	C	96	102	parallel
Strand 4	C	141	147	parallel
Strand 5	C	187	189	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	40	first strand
Strand 2	D	4	9	parallel
Strand 3	D	96	102	parallel
Strand 4	D	141	147	parallel
Strand 5	D	182	183	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	40	first strand
Strand 2	D	4	9	parallel
Strand 3	D	96	102	parallel
Strand 4	D	141	147	parallel
Strand 5	D	187	189	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	40	first strand
Strand 2	E	4	9	parallel
Strand 3	E	96	102	parallel
Strand 4	E	141	147	parallel
Strand 5	E	182	183	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	40	first strand
Strand 2	E	4	9	parallel
Strand 3	E	96	102	parallel
Strand 4	E	141	147	parallel
Strand 5	E	187	189	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	40	first strand
Strand 2	F	4	9	parallel
Strand 3	F	96	102	parallel
Strand 4	F	141	147	parallel
Strand 5	F	182	183	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	40	first strand
Strand 2	F	4	9	parallel
Strand 3	F	96	102	parallel
Strand 4	F	141	147	parallel
Strand 5	F	187	189	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	40	first strand
Strand 2	G	4	9	parallel
Strand 3	G	96	102	parallel
Strand 4	G	141	147	parallel
Strand 5	G	182	183	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	40	first strand
Strand 2	G	4	9	parallel
Strand 3	G	96	102	parallel
Strand 4	G	141	147	parallel
Strand 5	G	187	189	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	40	first strand
Strand 2	H	4	9	parallel
Strand 3	H	96	102	parallel
Strand 4	H	141	147	parallel
Strand 5	H	182	183	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	40	first strand
Strand 2	H	4	9	parallel
Strand 3	H	96	102	parallel
Strand 4	H	141	147	parallel
Strand 5	H	187	189	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	35	40	first strand
Strand 2	I	4	9	parallel
Strand 3	I	96	102	parallel
Strand 4	I	141	147	parallel
Strand 5	I	182	183	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	35	40	first strand
Strand 2	I	4	9	parallel
Strand 3	I	96	102	parallel
Strand 4	I	141	147	parallel
Strand 5	I	187	189	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	35	40	first strand
Strand 2	J	4	9	parallel
Strand 3	J	96	102	parallel
Strand 4	J	141	147	parallel
Strand 5	J	182	183	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	35	40	first strand
Strand 2	J	4	9	parallel
Strand 3	J	96	102	parallel
Strand 4	J	141	147	parallel
Strand 5	J	187	189	parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	40	first strand
Strand 2	K	4	9	parallel
Strand 3	K	96	102	parallel
Strand 4	K	141	147	parallel
Strand 5	K	182	183	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	35	40	first strand
Strand 2	K	4	9	parallel
Strand 3	K	96	102	parallel
Strand 4	K	141	147	parallel
Strand 5	K	187	189	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	40	first strand
Strand 2	L	4	9	parallel
Strand 3	L	96	102	parallel
Strand 4	L	141	147	parallel
Strand 5	L	182	183	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	35	40	first strand
Strand 2	L	4	9	parallel
Strand 3	L	96	102	parallel
Strand 4	L	141	147	parallel
Strand 5	L	187	189	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	35	40	first strand
Strand 2	M	4	9	parallel
Strand 3	M	96	102	parallel
Strand 4	M	141	147	parallel
Strand 5	M	182	183	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	35	40	first strand
Strand 2	M	4	9	parallel
Strand 3	M	96	102	parallel
Strand 4	M	141	147	parallel
Strand 5	M	187	189	parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	35	40	first strand
Strand 2	N	4	9	parallel
Strand 3	N	96	102	parallel
Strand 4	N	141	147	parallel
Strand 5	N	182	183	parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	35	40	first strand
Strand 2	N	4	9	parallel
Strand 3	N	96	102	parallel
Strand 4	N	141	147	parallel
Strand 5	N	187	189	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5EAI

Analysis of interatomic Contacts of Structural Units in PDB entry:
5EAI