Analysis of interatomic Contacts of Structural Units in PDB entry:
5EAW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5EAW entry

There are 2 chains in PDB entry 5EAW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 1056
B	MET 1	LEU 1056

There are100 helices in PDB entry 5EAW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	11	Right-handed alpha
Helix 2	AA2	A	21	35	Right-handed alpha
Helix 3	AA3	A	42	46	Right-handed 310
Helix 4	AA4	A	86	90	Right-handed 310
Helix 5	AA5	A	128	137	Right-handed alpha
Helix 6	AA6	A	137	147	Right-handed alpha
Helix 7	AA7	A	154	172	Right-handed alpha
Helix 8	AA8	A	176	189	Right-handed alpha
Helix 9	AA9	A	190	200	Right-handed alpha
Helix 10	AB1	A	203	226	Right-handed alpha
Helix 11	AB2	A	230	234	Right-handed 310
Helix 12	AB3	A	308	324	Right-handed alpha
Helix 13	AB4	A	348	368	Right-handed alpha
Helix 14	AB5	A	390	396	Right-handed alpha
Helix 15	AB6	A	399	410	Right-handed alpha
Helix 16	AB7	A	422	431	Right-handed alpha
Helix 17	AB8	A	435	455	Right-handed alpha
Helix 18	AB9	A	456	461	Right-handed 310
Helix 19	AC1	A	462	468	Right-handed alpha
Helix 20	AC2	A	469	475	Right-handed alpha
Helix 21	AC3	A	525	529	Right-handed 310
Helix 22	AC4	A	569	571	Right-handed 310
Helix 23	AC5	A	572	584	Right-handed alpha
Helix 24	AC6	A	586	597	Right-handed alpha
Helix 25	AC7	A	613	615	Right-handed 310
Helix 26	AC8	A	616	626	Right-handed alpha
Helix 27	AC9	A	628	640	Right-handed alpha
Helix 28	AD1	A	654	669	Right-handed alpha
Helix 29	AD2	A	679	693	Right-handed alpha
Helix 30	AD3	A	710	713	Right-handed 310
Helix 31	AD4	A	714	722	Right-handed alpha
Helix 32	AD5	A	726	737	Right-handed alpha
Helix 33	AD6	A	750	755	Right-handed alpha
Helix 34	AD7	A	769	774	Right-handed alpha
Helix 35	AD8	A	775	778	Right-handed 310
Helix 36	AD9	A	798	804	Right-handed alpha
Helix 37	AE1	A	809	815	Right-handed alpha
Helix 38	AE2	A	816	819	Right-handed 310
Helix 39	AE3	A	831	842	Right-handed alpha
Helix 40	AE4	A	851	857	Right-handed alpha
Helix 41	AE5	A	863	871	Right-handed alpha
Helix 42	AE6	A	879	888	Right-handed alpha
Helix 43	AE7	A	914	931	Right-handed alpha
Helix 44	AE8	A	934	936	Right-handed 310
Helix 45	AE9	A	944	958	Right-handed alpha
Helix 46	AF1	A	967	972	Right-handed 310
Helix 47	AF2	A	998	1006	Right-handed alpha
Helix 48	AF3	A	1018	1023	Right-handed alpha
Helix 49	AF4	A	1025	1038	Right-handed alpha
Helix 50	AF5	A	1049	1054	Right-handed alpha
Helix 51	AF6	B	3	11	Right-handed alpha
Helix 52	AF7	B	21	35	Right-handed alpha
Helix 53	AF8	B	42	46	Right-handed 310
Helix 54	AF9	B	86	90	Right-handed 310
Helix 55	AG1	B	128	135	Right-handed alpha
Helix 56	AG2	B	137	147	Right-handed alpha
Helix 57	AG3	B	154	172	Right-handed alpha
Helix 58	AG4	B	176	189	Right-handed alpha
Helix 59	AG5	B	190	200	Right-handed alpha
Helix 60	AG6	B	203	226	Right-handed alpha
Helix 61	AG7	B	230	234	Right-handed 310
Helix 62	AG8	B	308	324	Right-handed alpha
Helix 63	AG9	B	348	368	Right-handed alpha
Helix 64	AH1	B	390	396	Right-handed alpha
Helix 65	AH2	B	399	410	Right-handed alpha
Helix 66	AH3	B	422	432	Right-handed alpha
Helix 67	AH4	B	435	455	Right-handed alpha
Helix 68	AH5	B	456	459	Right-handed 310
Helix 69	AH6	B	462	468	Right-handed alpha
Helix 70	AH7	B	469	475	Right-handed alpha
Helix 71	AH8	B	525	529	Right-handed 310
Helix 72	AH9	B	569	571	Right-handed 310
Helix 73	AI1	B	572	584	Right-handed alpha
Helix 74	AI2	B	586	597	Right-handed alpha
Helix 75	AI3	B	613	615	Right-handed 310
Helix 76	AI4	B	616	626	Right-handed alpha
Helix 77	AI5	B	628	640	Right-handed alpha
Helix 78	AI6	B	654	669	Right-handed alpha
Helix 79	AI7	B	679	693	Right-handed alpha
Helix 80	AI8	B	710	713	Right-handed 310
Helix 81	AI9	B	714	722	Right-handed alpha
Helix 82	AJ1	B	726	737	Right-handed alpha
Helix 83	AJ2	B	749	754	Right-handed 310
Helix 84	AJ3	B	769	774	Right-handed alpha
Helix 85	AJ4	B	775	778	Right-handed 310
Helix 86	AJ5	B	798	804	Right-handed alpha
Helix 87	AJ6	B	809	815	Right-handed alpha
Helix 88	AJ7	B	816	819	Right-handed 310
Helix 89	AJ8	B	831	842	Right-handed alpha
Helix 90	AJ9	B	851	857	Right-handed alpha
Helix 91	AK1	B	863	871	Right-handed alpha
Helix 92	AK2	B	879	888	Right-handed alpha
Helix 93	AK3	B	914	931	Right-handed alpha
Helix 94	AK4	B	934	936	Right-handed 310
Helix 95	AK5	B	944	958	Right-handed alpha
Helix 96	AK6	B	967	972	Right-handed 310
Helix 97	AK7	B	998	1006	Right-handed alpha
Helix 98	AK8	B	1018	1023	Right-handed alpha
Helix 99	AK9	B	1025	1038	Right-handed alpha
Helix 100	AL1	B	1049	1054	Right-handed alpha

There are 18 sheets in PDB entry 5EAW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	109	111	first strand
Strand 2	A	79	84	parallel
Strand 3	A	62	70	anti-parallel
Strand 4	A	48	58	anti-parallel
Strand 5	A	97	100	anti-parallel
Strand 6	A	118	120	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	273	287	parallel
Strand 3	A	252	268	anti-parallel
Strand 4	A	236	237	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	273	287	parallel
Strand 3	A	290	299	anti-parallel
Strand 4	A	331	334	parallel
Strand 5	A	343	346	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	371	first strand
Strand 2	A	380	381	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	483	484	first strand
Strand 2	A	497	503	anti-parallel
Strand 3	A	544	548	anti-parallel
Strand 4	A	532	536	anti-parallel
Strand 5	A	518	523	anti-parallel
Strand 6	A	561	564	anti-parallel
Strand 7	A	483	484	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	699	first strand
Strand 2	A	739	741	parallel
Strand 3	A	673	676	parallel
Strand 4	A	757	762	parallel
Strand 5	A	780	787	parallel
Strand 6	A	644	649	parallel
Strand 7	A	821	824	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	826	827	first strand
Strand 2	A	848	849	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	964	966	first strand
Strand 2	A	938	941	parallel
Strand 3	A	976	982	parallel
Strand 4	A	1009	1017	parallel
Strand 5	A	893	897	parallel
Strand 6	A	1041	1043	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	906	908	first strand
Strand 2	A	911	913	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	109	111	first strand
Strand 2	B	79	84	parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	48	58	anti-parallel
Strand 5	B	97	100	anti-parallel
Strand 6	B	118	120	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	273	287	parallel
Strand 3	B	252	268	anti-parallel
Strand 4	B	236	237	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	273	287	parallel
Strand 3	B	290	299	anti-parallel
Strand 4	B	331	334	parallel
Strand 5	B	343	346	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	371	first strand
Strand 2	B	380	381	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	483	484	first strand
Strand 2	B	497	503	anti-parallel
Strand 3	B	544	548	anti-parallel
Strand 4	B	532	536	anti-parallel
Strand 5	B	518	523	anti-parallel
Strand 6	B	561	564	anti-parallel
Strand 7	B	483	484	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	699	first strand
Strand 2	B	739	743	parallel
Strand 3	B	673	677	parallel
Strand 4	B	757	762	parallel
Strand 5	B	780	787	parallel
Strand 6	B	644	649	parallel
Strand 7	B	821	824	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	826	827	first strand
Strand 2	B	848	849	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	964	966	first strand
Strand 2	B	938	941	parallel
Strand 3	B	976	982	parallel
Strand 4	B	1009	1017	parallel
Strand 5	B	893	897	parallel
Strand 6	B	1041	1043	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	906	908	first strand
Strand 2	B	911	913	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5EAW

Analysis of interatomic Contacts of Structural Units in PDB entry:
5EAW