Analysis of interatomic Contacts of Structural Units in PDB entry:
5ECF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ECF entry

There are 10 chains in PDB entry 5ECF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 31ILE 181
B
 ASP 32ILE 181
C
 ASP 32SER 180
D
 ASP 32SER 180
E
 ARG 31SER 180
F
 ASN 34PHE 179
G
 ARG 31SER 180
H
 ASP 32SER 180
I
 ASP 32SER 180
J
 ASN 34GLU 41
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 5ECF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 57Right-handed alpha
Helix 2
AA2
A
62 84Right-handed alpha
Helix 3
AA3
A
90 118Right-handed alpha
Helix 4
AA4
A
118 125Right-handed alpha
Helix 5
AA5
A
127 151Right-handed alpha
Helix 6
AA6
A
152 153Right-handed 310
Helix 7
AA7
A
154 156Right-handed 310
Helix 8
AA8
A
157 179Right-handed alpha
Helix 9
AA9
B
33 57Right-handed alpha
Helix 10
AB1
B
62 84Right-handed alpha
Helix 11
AB2
B
90 118Right-handed alpha
Helix 12
AB3
B
118 125Right-handed alpha
Helix 13
AB4
B
127 151Right-handed alpha
Helix 14
AB5
B
152 153Right-handed 310
Helix 15
AB6
B
154 156Right-handed 310
Helix 16
AB7
B
157 179Right-handed alpha
Helix 17
AB8
C
33 57Right-handed alpha
Helix 18
AB9
C
62 84Right-handed alpha
Helix 19
AC1
C
90 118Right-handed alpha
Helix 20
AC2
C
118 125Right-handed alpha
Helix 21
AC3
C
127 151Right-handed alpha
Helix 22
AC4
C
152 153Right-handed 310
Helix 23
AC5
C
154 156Right-handed 310
Helix 24
AC6
C
157 179Right-handed alpha
Helix 25
AC7
D
33 57Right-handed alpha
Helix 26
AC8
D
62 84Right-handed alpha
Helix 27
AC9
D
90 118Right-handed alpha
Helix 28
AD1
D
118 125Right-handed alpha
Helix 29
AD2
D
127 151Right-handed alpha
Helix 30
AD3
D
152 153Right-handed 310
Helix 31
AD4
D
154 156Right-handed 310
Helix 32
AD5
D
157 179Right-handed alpha
Helix 33
AD6
E
33 57Right-handed alpha
Helix 34
AD7
E
62 84Right-handed alpha
Helix 35
AD8
E
90 118Right-handed alpha
Helix 36
AD9
E
118 125Right-handed alpha
Helix 37
AE1
E
127 151Right-handed alpha
Helix 38
AE2
E
152 153Right-handed 310
Helix 39
AE3
E
154 156Right-handed 310
Helix 40
AE4
E
157 179Right-handed alpha
Helix 41
AE5
F
35 57Right-handed alpha
Helix 42
AE6
F
62 84Right-handed alpha
Helix 43
AE7
F
90 118Right-handed alpha
Helix 44
AE8
F
118 125Right-handed alpha
Helix 45
AE9
F
127 151Right-handed alpha
Helix 46
AF1
F
152 153Right-handed 310
Helix 47
AF2
F
154 156Right-handed 310
Helix 48
AF3
F
157 179Right-handed alpha
Helix 49
AF4
G
32 57Right-handed alpha
Helix 50
AF5
G
62 84Right-handed alpha
Helix 51
AF6
G
90 117Right-handed alpha
Helix 52
AF7
G
118 125Right-handed alpha
Helix 53
AF8
G
127 151Right-handed alpha
Helix 54
AF9
G
152 153Right-handed 310
Helix 55
AG1
G
154 156Right-handed 310
Helix 56
AG2
G
157 179Right-handed alpha
Helix 57
AG3
H
33 57Right-handed alpha
Helix 58
AG4
H
62 84Right-handed alpha
Helix 59
AG5
H
90 118Right-handed alpha
Helix 60
AG6
H
118 125Right-handed alpha
Helix 61
AG7
H
127 151Right-handed alpha
Helix 62
AG8
H
152 153Right-handed 310
Helix 63
AG9
H
154 156Right-handed 310
Helix 64
AH1
H
157 179Right-handed alpha
Helix 65
AH2
I
33 57Right-handed alpha
Helix 66
AH3
I
62 84Right-handed alpha
Helix 67
AH4
I
90 118Right-handed alpha
Helix 68
AH5
I
118 125Right-handed alpha
Helix 69
AH6
I
127 151Right-handed alpha
Helix 70
AH7
I
152 153Right-handed 310
Helix 71
AH8
I
154 156Right-handed 310
Helix 72
AH9
I
157 179Right-handed alpha
Helix 73
AI1
J
35 57Right-handed alpha
Helix 74
AI2
J
64 84Right-handed alpha
Helix 75
AI3
J
90 117Right-handed alpha
Helix 76
AI4
J
129 151Right-handed alpha
Helix 77
AI5
J
152 153Right-handed 310
Helix 78
AI6
J
154 156Right-handed 310
Helix 79
AI7
J
157 178Right-handed alpha
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There are no sheets in PDB entry 5ECF
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