Analysis of interatomic Contacts of Structural Units in PDB entry:
5EE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EE2 entry

There is 1 chain in PDB entry 5EE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 194THR 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 5EE2. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
314 318Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5EE2.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
212 215first strand
Strand 2
A
198 209anti-parallel
Strand 3
A
319 329anti-parallel
Strand 4
A
304 310anti-parallel
Strand 5
A
283 292anti-parallel
Strand 6
A
273 280anti-parallel
Strand 7
A
262 270anti-parallel
Strand 8
A
247 252anti-parallel
Strand 9
A
237 242anti-parallel
Strand 10
A
198 209anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il