Analysis of interatomic Contacts of Structural Units in PDB entry:
5EEA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EEA entry

There are 12 chains in PDB entry 5EEA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 T 1 C 18
E
 G 1 A 18
C
 T 1 C 18
F
 G 1 A 18
H
 T 1 C 18
I
 G 1 A 18
K
 T 1 C 18
L
 G 1 A 18
B
 ARG 217LYS 277
A
 ARG 217VAL 278
G
 ARG 217LYS 279
J
 ARG 217LYS 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5EEA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
224 238Right-handed alpha
Helix 2
AA2
B
242 254Right-handed alpha
Helix 3
AA3
B
256 276Right-handed alpha
Helix 4
AA4
A
224 238Right-handed alpha
Helix 5
AA5
A
242 254Right-handed alpha
Helix 6
AA6
A
256 276Right-handed alpha
Helix 7
AA7
G
224 238Right-handed alpha
Helix 8
AA8
G
242 254Right-handed alpha
Helix 9
AA9
G
256 275Right-handed alpha
Helix 10
AB1
J
224 238Right-handed alpha
Helix 11
AB2
J
242 254Right-handed alpha
Helix 12
AB3
J
256 275Right-handed alpha
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There are no sheets in PDB entry 5EEA
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il