Analysis of interatomic Contacts of Structural Units in PDB entry:
5EEO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EEO entry

There is 1 chain in PDB entry 5EEO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 6ILE 839
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 5EEO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 20Right-handed 310
Helix 2
AA2
A
31 36Right-handed 310
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
133 137Right-handed 310
Helix 5
AA5
A
150 154Right-handed 310
Helix 6
AA6
A
155 157Right-handed 310
Helix 7
AA7
A
158 171Right-handed alpha
Helix 8
AA8
A
198 202Right-handed 310
Helix 9
AA9
A
241 245Right-handed 310
Helix 10
AB1
A
250 255Right-handed 310
Helix 11
AB2
A
256 265Right-handed alpha
Helix 12
AB3
A
265 276Right-handed alpha
Helix 13
AB4
A
285 291Right-handed alpha
Helix 14
AB5
A
292 294Right-handed 310
Helix 15
AB6
A
300 308Right-handed alpha
Helix 16
AB7
A
312 317Right-handed 310
Helix 17
AB8
A
330 334Right-handed 310
Helix 18
AB9
A
338 341Right-handed 310
Helix 19
AC1
A
342 353Right-handed alpha
Helix 20
AC2
A
394 401Right-handed alpha
Helix 21
AC3
A
409 423Right-handed alpha
Helix 22
AC4
A
472 497Right-handed alpha
Helix 23
AC5
A
503 518Right-handed alpha
Helix 24
AC6
A
522 529Right-handed alpha
Helix 25
AC7
A
530 533Right-handed 310
Helix 26
AC8
A
534 546Right-handed alpha
Helix 27
AC9
A
551 557Right-handed alpha
Helix 28
AD1
A
559 561Right-handed 310
Helix 29
AD2
A
562 572Right-handed alpha
Helix 30
AD3
A
573 574Right-handed 310
Helix 31
AD4
A
575 579Right-handed 310
Helix 32
AD5
A
580 588Right-handed alpha
Helix 33
AD6
A
608 629Right-handed alpha
Helix 34
AD7
A
630 632Right-handed 310
Helix 35
AD8
A
635 641Right-handed alpha
Helix 36
AD9
A
642 655Right-handed alpha
Helix 37
AE1
A
657 661Right-handed 310
Helix 38
AE2
A
671 687Right-handed alpha
Helix 39
AE3
A
687 695Right-handed alpha
Helix 40
AE4
A
696 702Right-handed alpha
Helix 41
AE5
A
720 729Right-handed alpha
Helix 42
AE6
A
729 738Right-handed alpha
Helix 43
AE7
A
740 755Right-handed alpha
Helix 44
AE8
A
775 802Right-handed alpha
Helix 45
AE9
A
805 810Right-handed alpha
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There are 7 sheets in PDB entry 5EEO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
79 86anti-parallel
Strand 3
A
7 16anti-parallel
Strand 4
A
107 114anti-parallel
Strand 5
A
123 131anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
40 50anti-parallel
Strand 3
A
62 63anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
40 50anti-parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
141 144anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
217 218anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
324 326anti-parallel
Strand 3
A
318 319anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 361first strand
Strand 2
A
404 408anti-parallel
Strand 3
A
430 437anti-parallel
Strand 4
A
443 451anti-parallel
Strand 5
A
465 467anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 593first strand
Strand 2
A
601 603anti-parallel
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