Analysis of interatomic Contacts of Structural Units in PDB entry:
5EHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EHF entry

There is 1 chain in PDB entry 5EHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLN 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5EHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 58Right-handed 310
Helix 2
AA2
A
73 77Right-handed 310
Helix 3
AA3
A
114 119Right-handed 310
Helix 4
AA4
A
133 137Right-handed 310
Helix 5
AA5
A
141 143Right-handed 310
Helix 6
AA6
A
155 159Right-handed 310
Helix 7
AA7
A
272 276Right-handed 310
Helix 8
AA8
A
303 307Right-handed 310
Helix 9
AA9
A
352 359Right-handed alpha
Helix 10
AB1
A
363 367Right-handed 310
Helix 11
AB2
A
369 371Right-handed 310
Helix 12
AB3
A
453 459Right-handed alpha
Helix 13
AB4
A
468 476Right-handed alpha
Helix 14
AB5
A
479 484Right-handed alpha
Helix 15
AB6
A
484 491Right-handed alpha
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There are 7 sheets in PDB entry 5EHF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
5 15anti-parallel
Strand 3
A
43 50parallel
Strand 4
A
92 98anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
121 127parallel
Strand 3
A
104 110anti-parallel
Strand 4
A
63 66anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 171first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
196 203parallel
Strand 4
A
244 250anti-parallel
Strand 5
A
219 224anti-parallel
Strand 6
A
227 234anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 191first strand
Strand 2
A
278 283parallel
Strand 3
A
257 264anti-parallel
Strand 4
A
210 214anti-parallel
Strand 5
A
237 239anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 329first strand
Strand 2
A
381 387parallel
Strand 3
A
434 440anti-parallel
Strand 4
A
404 408anti-parallel
Strand 5
A
422 423anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
339 341anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
462 467parallel
Strand 3
A
445 451anti-parallel
Strand 4
A
396 399anti-parallel
Strand 5
A
425 427anti-parallel
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