Analysis of interatomic Contacts of Structural Units in PDB entry:
5EI0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EI0 entry

There are 2 chains in PDB entry 5EI0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 40ILE 412
E
 GLN 41GLY 413
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5EI0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 67Right-handed alpha
Helix 2
AA2
A
75 87Right-handed alpha
Helix 3
AA3
A
91 102Right-handed alpha
Helix 4
AA4
A
108 124Right-handed alpha
Helix 5
AA5
A
147 158Right-handed alpha
Helix 6
AA6
A
169 185Right-handed alpha
Helix 7
AA7
A
279 286Right-handed alpha
Helix 8
AA8
A
290 298Right-handed alpha
Helix 9
AA9
A
319 324Right-handed alpha
Helix 10
AB1
A
325 327Right-handed 310
Helix 11
AB2
A
329 333Right-handed 310
Helix 12
AB3
E
44 67Right-handed alpha
Helix 13
AB4
E
75 87Right-handed alpha
Helix 14
AB5
E
88 90Right-handed 310
Helix 15
AB6
E
91 102Right-handed alpha
Helix 16
AB7
E
108 125Right-handed alpha
Helix 17
AB8
E
147 158Right-handed alpha
Helix 18
AB9
E
169 185Right-handed alpha
Helix 19
AC1
E
279 286Right-handed alpha
Helix 20
AC2
E
290 298Right-handed alpha
Helix 21
AC3
E
319 323Right-handed alpha
Helix 22
AC4
E
324 327Right-handed 310
Helix 23
AC5
E
329 333Right-handed 310
Helix 24
AC6
E
337 341Right-handed 310
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There are 7 sheets in PDB entry 5EI0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
401 408anti-parallel
Strand 3
A
390 396anti-parallel
Strand 4
A
268 275anti-parallel
Strand 5
A
257 263anti-parallel
Strand 6
A
235 252anti-parallel
Strand 7
A
224 229anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
401 408anti-parallel
Strand 3
A
390 396anti-parallel
Strand 4
A
268 275anti-parallel
Strand 5
A
257 263anti-parallel
Strand 6
A
235 252anti-parallel
Strand 7
A
300 309anti-parallel
Strand 8
A
382 385parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
130 141anti-parallel
Strand 3
A
161 165parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
130 141anti-parallel
Strand 3
A
202 213anti-parallel
Strand 4
A
364 376anti-parallel
Strand 5
A
348 360anti-parallel
Strand 6
A
311 318anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 74first strand
Strand 2
E
401 408anti-parallel
Strand 3
E
390 396anti-parallel
Strand 4
E
268 275anti-parallel
Strand 5
E
257 263anti-parallel
Strand 6
E
234 252anti-parallel
Strand 7
E
224 231anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 74first strand
Strand 2
E
401 408anti-parallel
Strand 3
E
390 396anti-parallel
Strand 4
E
268 275anti-parallel
Strand 5
E
257 263anti-parallel
Strand 6
E
234 252anti-parallel
Strand 7
E
300 309anti-parallel
Strand 8
E
382 385parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
161 165first strand
Strand 2
E
131 141parallel
Strand 3
E
202 213anti-parallel
Strand 4
E
364 377anti-parallel
Strand 5
E
347 360anti-parallel
Strand 6
E
311 318anti-parallel
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