Analysis of interatomic Contacts of Structural Units in PDB entry:
5EJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EJ0 entry

There is 1 chain in PDB entry 5EJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 4ASP 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5EJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 21Right-handed 310
Helix 2
AA2
A
78 82Right-handed 310
Helix 3
AA3
A
91 106Right-handed alpha
Helix 4
AA4
A
107 116Right-handed alpha
Helix 5
AA5
A
132 134Right-handed 310
Helix 6
AA6
A
135 146Right-handed alpha
Helix 7
AA7
A
192 205Right-handed alpha
Helix 8
AA8
A
211 223Right-handed alpha
Helix 9
AA9
A
232 236Right-handed 310
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There are 2 sheets in PDB entry 5EJ0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
62 67parallel
Strand 3
A
6 11parallel
Strand 4
A
120 125parallel
Strand 5
A
187 191anti-parallel
Strand 6
A
150 152anti-parallel
Strand 7
A
227 230parallel
Strand 8
A
172 178anti-parallel
Strand 9
A
164 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
238 239anti-parallel
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