Analysis of interatomic Contacts of Structural Units in PDB entry:
5EJ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EJ2 entry

There are 4 chains in PDB entry 5EJ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 10LYS 286
B
 THR 10LYS 286
C
 THR 10LYS 286
D
 THR 10LYS 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5EJ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 38Right-handed alpha
Helix 2
AA2
A
60 74Right-handed alpha
Helix 3
AA3
A
87 103Right-handed alpha
Helix 4
AA4
A
120 124Right-handed 310
Helix 5
AA5
A
125 137Right-handed alpha
Helix 6
AA6
A
137 155Right-handed alpha
Helix 7
AA7
A
165 169Right-handed 310
Helix 8
AA8
A
175 197Right-handed alpha
Helix 9
AA9
A
218 226Right-handed alpha
Helix 10
AB1
A
233 243Right-handed alpha
Helix 11
AB2
A
253 266Right-handed alpha
Helix 12
AB3
A
267 270Right-handed 310
Helix 13
AB4
A
282 286Right-handed 310
Helix 14
AB5
B
25 38Right-handed alpha
Helix 15
AB6
B
60 74Right-handed alpha
Helix 16
AB7
B
87 103Right-handed alpha
Helix 17
AB8
B
120 124Right-handed 310
Helix 18
AB9
B
125 137Right-handed alpha
Helix 19
AC1
B
137 155Right-handed alpha
Helix 20
AC2
B
165 169Right-handed 310
Helix 21
AC3
B
175 197Right-handed alpha
Helix 22
AC4
B
218 226Right-handed alpha
Helix 23
AC5
B
233 244Right-handed alpha
Helix 24
AC6
B
253 266Right-handed alpha
Helix 25
AC7
B
267 270Right-handed 310
Helix 26
AC8
B
282 286Right-handed 310
Helix 27
AC9
C
25 38Right-handed alpha
Helix 28
AD1
C
60 74Right-handed alpha
Helix 29
AD2
C
87 103Right-handed alpha
Helix 30
AD3
C
120 124Right-handed 310
Helix 31
AD4
C
125 137Right-handed alpha
Helix 32
AD5
C
137 155Right-handed alpha
Helix 33
AD6
C
165 169Right-handed 310
Helix 34
AD7
C
175 197Right-handed alpha
Helix 35
AD8
C
218 226Right-handed alpha
Helix 36
AD9
C
233 244Right-handed alpha
Helix 37
AE1
C
253 266Right-handed alpha
Helix 38
AE2
C
267 270Right-handed 310
Helix 39
AE3
C
282 286Right-handed 310
Helix 40
AE4
D
25 38Right-handed alpha
Helix 41
AE5
D
60 73Right-handed alpha
Helix 42
AE6
D
87 103Right-handed alpha
Helix 43
AE7
D
120 124Right-handed 310
Helix 44
AE8
D
125 137Right-handed alpha
Helix 45
AE9
D
137 155Right-handed alpha
Helix 46
AF1
D
165 169Right-handed 310
Helix 47
AF2
D
175 197Right-handed alpha
Helix 48
AF3
D
218 226Right-handed alpha
Helix 49
AF4
D
233 244Right-handed alpha
Helix 50
AF5
D
253 266Right-handed alpha
Helix 51
AF6
D
267 270Right-handed 310
Helix 52
AF7
D
282 286Right-handed 310
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There are 4 sheets in PDB entry 5EJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
41 46parallel
Strand 3
A
17 21parallel
Strand 4
A
107 110parallel
Strand 5
A
158 163parallel
Strand 6
A
201 208parallel
Strand 7
A
276 279parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
41 46parallel
Strand 3
B
17 21parallel
Strand 4
B
107 110parallel
Strand 5
B
158 163parallel
Strand 6
B
201 208parallel
Strand 7
B
276 279parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 82first strand
Strand 2
C
41 46parallel
Strand 3
C
17 21parallel
Strand 4
C
107 110parallel
Strand 5
C
158 163parallel
Strand 6
C
201 208parallel
Strand 7
C
276 279parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 82first strand
Strand 2
D
41 46parallel
Strand 3
D
17 21parallel
Strand 4
D
107 110parallel
Strand 5
D
158 163parallel
Strand 6
D
201 208parallel
Strand 7
D
276 279parallel
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