Analysis of interatomic Contacts of Structural Units in PDB entry:
5EJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EJQ entry

There is 1 chain in PDB entry 5EJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1119HIS 1626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5EJQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1124 1131Right-handed 310
Helix 2
AA2
A
1132 1141Right-handed alpha
Helix 3
AA3
A
1142 1146Right-handed 310
Helix 4
AA4
A
1169 1189Right-handed alpha
Helix 5
AA5
A
1192 1197Right-handed alpha
Helix 6
AA6
A
1197 1215Right-handed alpha
Helix 7
AA7
A
1218 1230Right-handed alpha
Helix 8
AA8
A
1235 1251Right-handed alpha
Helix 9
AA9
A
1259 1273Right-handed alpha
Helix 10
AB1
A
1277 1298Right-handed alpha
Helix 11
AB2
A
1305 1314Right-handed alpha
Helix 12
AB3
A
1339 1351Right-handed alpha
Helix 13
AB4
A
1356 1361Right-handed alpha
Helix 14
AB5
A
1380 1396Right-handed alpha
Helix 15
AB6
A
1421 1441Right-handed alpha
Helix 16
AB7
A
1448 1465Right-handed alpha
Helix 17
AB8
A
1468 1479Right-handed alpha
Helix 18
AB9
A
1485 1492Right-handed alpha
Helix 19
AC1
A
1492 1502Right-handed alpha
Helix 20
AC2
A
1507 1521Right-handed alpha
Helix 21
AC3
A
1569 1573Right-handed 310
Helix 22
AC4
A
1601 1624Right-handed alpha
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There are 3 sheets in PDB entry 5EJQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1329 1334first strand
Strand 2
A
1318 1323anti-parallel
Strand 3
A
1403 1409parallel
Strand 4
A
1362 1368anti-parallel
Strand 5
A
1371 1373anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1528 1533first strand
Strand 2
A
1544 1550anti-parallel
Strand 3
A
1553 1558anti-parallel
Strand 4
A
1563 1568anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1585 1588first strand
Strand 2
A
1594 1597anti-parallel
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