Analysis of interatomic Contacts of Structural Units in PDB entry:
5EJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EJU entry

There are 2 chains in PDB entry 5EJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PHE 61
A
 ASN 65TYR 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 5EJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 61Right-handed 310
Helix 2
AA2
A
77 82Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5EJU.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 139first strand
Strand 2
A
153 163anti-parallel
Strand 3
A
168 177anti-parallel
Strand 4
A
87 95anti-parallel
Strand 5
A
100 110anti-parallel
Strand 6
A
113 123anti-parallel
Strand 7
A
8 18parallel
Strand 8
A
21 32anti-parallel
Strand 9
A
37 46anti-parallel
Strand 10
A
206 216anti-parallel
Strand 11
A
189 200anti-parallel
Strand 12
A
144 147anti-parallel
Strand 13
A
153 163anti-parallel
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