Analysis of interatomic Contacts of Structural Units in PDB entry:
5EJY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EJY entry

There is 1 chain in PDB entry 5EJY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 37ASN 537
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5EJY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 47Right-handed 310
Helix 2
AA2
A
51 60Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
88 107Right-handed alpha
Helix 5
AA5
A
111 116Right-handed alpha
Helix 6
AA6
A
116 134Right-handed alpha
Helix 7
AA7
A
137 149Right-handed alpha
Helix 8
AA8
A
154 170Right-handed alpha
Helix 9
AA9
A
178 192Right-handed alpha
Helix 10
AB1
A
196 217Right-handed alpha
Helix 11
AB2
A
224 233Right-handed alpha
Helix 12
AB3
A
258 270Right-handed alpha
Helix 13
AB4
A
275 280Right-handed alpha
Helix 14
AB5
A
299 314Right-handed alpha
Helix 15
AB6
A
340 360Right-handed alpha
Helix 16
AB7
A
367 384Right-handed alpha
Helix 17
AB8
A
387 398Right-handed alpha
Helix 18
AB9
A
404 411Right-handed alpha
Helix 19
AC1
A
411 421Right-handed alpha
Helix 20
AC2
A
426 440Right-handed alpha
Helix 21
AC3
A
488 492Right-handed 310
Helix 22
AC4
A
520 537Right-handed alpha
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There are 3 sheets in PDB entry 5EJY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 253first strand
Strand 2
A
237 243anti-parallel
Strand 3
A
322 328parallel
Strand 4
A
281 287anti-parallel
Strand 5
A
290 292anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 452first strand
Strand 2
A
463 469anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
482 487anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 499first strand
Strand 2
A
503 507anti-parallel
Strand 3
A
513 517anti-parallel
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