Analysis of interatomic Contacts of Structural Units in PDB entry:
5EK0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EK0 entry

There are 4 chains in PDB entry 5EK0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -4ASP 1737
B
 MET 1493ASP 1737
C
 MET 1493ASP 1737
D
 MET 1493ASP 1737
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 5EK0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 1496Right-handed 310
Helix 2
AA2
A
1497 1502Right-handed alpha
Helix 3
AA3
A
1503 1523Right-handed alpha
Helix 4
AA4
A
1529 1559Right-handed alpha
Helix 5
AA5
A
1559 1564Right-handed alpha
Helix 6
AA6
A
1565 1591Right-handed alpha
Helix 7
AA7
A
1594 1602Right-handed alpha
Helix 8
AA8
A
1605 1611Right-handed alpha
Helix 9
AA9
A
1611 1616Right-handed alpha
Helix 10
AB1
A
1618 1628Right-handed alpha
Helix 11
AB2
A
1629 1655Right-handed alpha
Helix 12
AB3
A
1659 1664Right-handed alpha
Helix 13
AB4
A
1665 1678Right-handed alpha
Helix 14
AB5
A
1686 1694Right-handed alpha
Helix 15
AB6
A
1697 1737Right-handed alpha
Helix 16
AB7
B
1494 1501Right-handed alpha
Helix 17
AB8
B
1504 1522Right-handed alpha
Helix 18
AB9
B
1529 1558Right-handed alpha
Helix 19
AC1
B
1560 1565Right-handed alpha
Helix 20
AC2
B
1565 1591Right-handed alpha
Helix 21
AC3
B
1594 1602Right-handed alpha
Helix 22
AC4
B
1603 1614Right-handed 310
Helix 23
AC5
B
1618 1628Right-handed alpha
Helix 24
AC6
B
1629 1632Right-handed 310
Helix 25
AC7
B
1633 1655Right-handed alpha
Helix 26
AC8
B
1659 1664Right-handed alpha
Helix 27
AC9
B
1665 1678Right-handed alpha
Helix 28
AD1
B
1686 1694Right-handed alpha
Helix 29
AD2
B
1697 1737Right-handed alpha
Helix 30
AD3
C
1494 1502Right-handed alpha
Helix 31
AD4
C
1503 1523Right-handed alpha
Helix 32
AD5
C
1529 1559Right-handed alpha
Helix 33
AD6
C
1565 1591Right-handed alpha
Helix 34
AD7
C
1596 1602Right-handed alpha
Helix 35
AD8
C
1605 1615Right-handed alpha
Helix 36
AD9
C
1618 1628Right-handed alpha
Helix 37
AE1
C
1629 1655Right-handed alpha
Helix 38
AE2
C
1659 1664Right-handed alpha
Helix 39
AE3
C
1665 1679Right-handed alpha
Helix 40
AE4
C
1686 1694Right-handed alpha
Helix 41
AE5
C
1697 1737Right-handed alpha
Helix 42
AE6
D
1496 1502Right-handed alpha
Helix 43
AE7
D
1503 1523Right-handed alpha
Helix 44
AE8
D
1529 1559Right-handed alpha
Helix 45
AE9
D
1560 1564Right-handed 310
Helix 46
AF1
D
1565 1591Right-handed alpha
Helix 47
AF2
D
1596 1603Right-handed alpha
Helix 48
AF3
D
1605 1616Right-handed alpha
Helix 49
AF4
D
1618 1628Right-handed alpha
Helix 50
AF5
D
1629 1656Right-handed alpha
Helix 51
AF6
D
1659 1664Right-handed alpha
Helix 52
AF7
D
1665 1678Right-handed alpha
Helix 53
AF8
D
1686 1694Right-handed alpha
Helix 54
AF9
D
1697 1735Right-handed alpha
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There are no sheets in PDB entry 5EK0
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