Analysis of interatomic Contacts of Structural Units in PDB entry:
5EK9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EK9 entry

There are 2 chains in PDB entry 5EK9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 348PRO 454
B
 GLU 348PRO 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5EK9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
348 362Right-handed alpha
Helix 2
AA2
A
365 370Right-handed alpha
Helix 3
AA3
A
371 373Right-handed 310
Helix 4
AA4
A
377 382Right-handed alpha
Helix 5
AA5
A
385 390Right-handed alpha
Helix 6
AA6
A
395 405Right-handed alpha
Helix 7
AA7
A
410 429Right-handed alpha
Helix 8
AA8
A
433 453Right-handed alpha
Helix 9
AA9
B
349 362Right-handed alpha
Helix 10
AB1
B
365 370Right-handed alpha
Helix 11
AB2
B
371 373Right-handed 310
Helix 12
AB3
B
385 390Right-handed alpha
Helix 13
AB4
B
395 405Right-handed alpha
Helix 14
AB5
B
410 429Right-handed alpha
Helix 15
AB6
B
433 452Right-handed alpha
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There are no sheets in PDB entry 5EK9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il