Analysis of interatomic Contacts of Structural Units in PDB entry:
5EO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EO4 entry

There are 3 chains in PDB entry 5EO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 155
B
 MET 1PRO 155
C
 GLN 4PRO 155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5EO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 17Right-handed 310
Helix 2
AA2
A
24 43Right-handed alpha
Helix 3
AA3
A
46 54Right-handed alpha
Helix 4
AA4
A
125 138Right-handed alpha
Helix 5
AA5
B
13 17Right-handed 310
Helix 6
AA6
B
24 42Right-handed alpha
Helix 7
AA7
B
46 54Right-handed alpha
Helix 8
AA8
B
125 139Right-handed alpha
Helix 9
AA9
C
13 17Right-handed 310
Helix 10
AB1
C
24 43Right-handed alpha
Helix 11
AB2
C
46 54Right-handed alpha
Helix 12
AB3
C
125 139Right-handed alpha
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There are 2 sheets in PDB entry 5EO4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 66first strand
Strand 2
A
103 115anti-parallel
Strand 3
A
89 98anti-parallel
Strand 4
A
75 85anti-parallel
Strand 5
A
2 11anti-parallel
Strand 6
B
2 11anti-parallel
Strand 7
B
75 85anti-parallel
Strand 8
B
89 98anti-parallel
Strand 9
B
103 115anti-parallel
Strand 10
B
120 121anti-parallel
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There are 15 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
103 115anti-parallel
Strand 3
A
89 98anti-parallel
Strand 4
A
75 85anti-parallel
Strand 5
A
2 11anti-parallel
Strand 6
B
2 11anti-parallel
Strand 7
B
75 85anti-parallel
Strand 8
B
89 98anti-parallel
Strand 9
B
103 115anti-parallel
Strand 10
B
55 66anti-parallel
Strand 11
C
55 66anti-parallel
Strand 12
C
103 115anti-parallel
Strand 13
C
89 98anti-parallel
Strand 14
C
75 85anti-parallel
Strand 15
C
6 11anti-parallel
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