Analysis of interatomic Contacts of Structural Units in PDB entry:
5EOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EOG entry

There are 4 chains in PDB entry 5EOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0LEU 359
B
 GLY -2LEU 359
D
 ALA -1LEU 359
F
 GLY -2ASN 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 5EOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 49Right-handed alpha
Helix 2
AA2
A
107 111Right-handed 310
Helix 3
AA3
A
113 117Right-handed 310
Helix 4
AA4
A
124 140Right-handed alpha
Helix 5
AA5
A
196 206Right-handed alpha
Helix 6
AA6
A
234 242Right-handed alpha
Helix 7
AA7
A
246 262Right-handed alpha
Helix 8
AA8
A
270 285Right-handed alpha
Helix 9
AA9
A
287 294Right-handed 310
Helix 10
AB1
A
295 314Right-handed alpha
Helix 11
AB2
A
331 352Right-handed alpha
Helix 12
AB3
A
353 359Right-handed 310
Helix 13
AB4
B
-1 49Right-handed alpha
Helix 14
AB5
B
113 117Right-handed 310
Helix 15
AB6
B
124 143Right-handed alpha
Helix 16
AB7
B
196 206Right-handed alpha
Helix 17
AB8
B
234 242Right-handed alpha
Helix 18
AB9
B
246 262Right-handed alpha
Helix 19
AC1
B
270 285Right-handed alpha
Helix 20
AC2
B
287 294Right-handed 310
Helix 21
AC3
B
295 314Right-handed alpha
Helix 22
AC4
B
331 352Right-handed alpha
Helix 23
AC5
B
353 359Right-handed 310
Helix 24
AC6
D
1 19Right-handed alpha
Helix 25
AC7
D
19 41Right-handed alpha
Helix 26
AC8
D
125 142Right-handed alpha
Helix 27
AC9
D
182 187Right-handed 310
Helix 28
AD1
D
197 207Right-handed alpha
Helix 29
AD2
D
234 242Right-handed alpha
Helix 30
AD3
D
246 262Right-handed alpha
Helix 31
AD4
D
270 285Right-handed alpha
Helix 32
AD5
D
287 294Right-handed 310
Helix 33
AD6
D
295 314Right-handed alpha
Helix 34
AD7
D
331 352Right-handed alpha
Helix 35
AD8
D
353 358Right-handed 310
Helix 36
AD9
F
-1 19Right-handed alpha
Helix 37
AE1
F
19 49Right-handed alpha
Helix 38
AE2
F
113 117Right-handed 310
Helix 39
AE3
F
124 141Right-handed alpha
Helix 40
AE4
F
182 187Right-handed 310
Helix 41
AE5
F
196 206Right-handed alpha
Helix 42
AE6
F
234 242Right-handed alpha
Helix 43
AE7
F
246 262Right-handed alpha
Helix 44
AE8
F
270 285Right-handed alpha
Helix 45
AE9
F
288 294Right-handed 310
Helix 46
AF1
F
295 314Right-handed alpha
Helix 47
AF2
F
331 352Right-handed alpha
Helix 48
AF3
F
354 359Right-handed alpha
Helix 49
AF4
C
2 49Right-handed alpha
Helix 50
AF5
C
106 111Right-handed 310
Helix 51
AF6
C
113 117Right-handed 310
Helix 52
AF7
C
124 143Right-handed alpha
Helix 53
AF8
C
145 147Right-handed 310
Helix 54
AF9
C
181 185Right-handed 310
Helix 55
AG1
C
196 206Right-handed alpha
Helix 56
AG2
C
234 242Right-handed alpha
Helix 57
AG3
C
246 262Right-handed alpha
Helix 58
AG4
C
270 285Right-handed alpha
Helix 59
AG5
C
287 294Right-handed 310
Helix 60
AG6
C
295 313Right-handed alpha
Helix 61
AG7
C
331 352Right-handed alpha
Helix 62
AG8
C
353 359Right-handed 310
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There are 10 sheets in PDB entry 5EOG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 70first strand
Strand 2
A
73 79anti-parallel
Strand 3
A
166 173parallel
Strand 4
A
158 162anti-parallel
Strand 5
A
149 151anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
230 233anti-parallel
Strand 3
A
209 211anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
73 79anti-parallel
Strand 3
B
166 176parallel
Strand 4
B
208 211anti-parallel
Strand 5
B
230 233anti-parallel
Strand 6
B
97 101anti-parallel
Strand 7
B
87 89anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
73 79anti-parallel
Strand 3
B
166 176parallel
Strand 4
B
158 162anti-parallel
Strand 5
B
149 151anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
67 68first strand
Strand 2
D
74 75anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 162first strand
Strand 2
D
166 167anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
66 70first strand
Strand 2
F
73 79anti-parallel
Strand 3
F
166 176parallel
Strand 4
F
159 162anti-parallel
Strand 5
F
149 151anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
66 70first strand
Strand 2
F
73 79anti-parallel
Strand 3
F
166 176parallel
Strand 4
F
208 211anti-parallel
Strand 5
F
231 233anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 68first strand
Strand 2
C
73 79anti-parallel
Strand 3
C
166 176parallel
Strand 4
C
208 211anti-parallel
Strand 5
C
230 233anti-parallel
Strand 6
C
97 102anti-parallel
Strand 7
C
86 89anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 68first strand
Strand 2
C
73 79anti-parallel
Strand 3
C
166 176parallel
Strand 4
C
158 162anti-parallel
Strand 5
C
149 151anti-parallel
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