Analysis of interatomic Contacts of Structural Units in PDB entry:
5EOW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EOW entry

There is 1 chain in PDB entry 5EOW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5LEU 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5EOW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
49 59Right-handed alpha
Helix 3
AA3
A
61 69Right-handed alpha
Helix 4
AA4
A
91 100Right-handed alpha
Helix 5
AA5
A
108 118Right-handed alpha
Helix 6
AA6
A
163 171Right-handed alpha
Helix 7
AA7
A
195 199Right-handed 310
Helix 8
AA8
A
245 253Right-handed alpha
Helix 9
AA9
A
257 266Right-handed alpha
Helix 10
AB1
A
292 297Right-handed alpha
Helix 11
AB2
A
305 325Right-handed alpha
Helix 12
AB3
A
328 354Right-handed alpha
Helix 13
AB4
A
363 368Right-handed alpha
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There are 4 sheets in PDB entry 5EOW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
29 33parallel
Strand 3
A
6 10parallel
Strand 4
A
154 157parallel
Strand 5
A
289 291parallel
Strand 6
A
285 286anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 48first strand
Strand 2
A
104 107anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 90first strand
Strand 2
A
74 79anti-parallel
Strand 3
A
202 206parallel
Strand 4
A
211 216anti-parallel
Strand 5
A
224 231anti-parallel
Strand 6
A
180 187anti-parallel
Strand 7
A
270 275anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
140 144anti-parallel
Strand 3
A
149 152anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il