Analysis of interatomic Contacts of Structural Units in PDB entry:
5EQT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EQT entry

There is 1 chain in PDB entry 5EQT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 102THR 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5EQT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 108Right-handed 310
Helix 2
AA2
A
111 122Right-handed alpha
Helix 3
AA3
A
122 128Right-handed alpha
Helix 4
AA4
A
132 136Right-handed 310
Helix 5
AA5
A
152 164Right-handed alpha
Helix 6
AA6
A
174 177Right-handed 310
Helix 7
AA7
A
182 198Right-handed alpha
Helix 8
AA8
A
208 213Right-handed alpha
Helix 9
AA9
A
224 238Right-handed alpha
Helix 10
AB1
A
254 258Right-handed 310
Helix 11
AB2
A
259 263Right-handed 310
Helix 12
AB3
A
278 289Right-handed alpha
Helix 13
AB4
A
299 306Right-handed alpha
Helix 14
AB5
A
311 329Right-handed alpha
Helix 15
AB6
A
335 347Right-handed alpha
Helix 16
AB7
A
348 358Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5EQT.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
201 206parallel
Strand 3
A
246 252parallel
Strand 4
A
142 146parallel
Strand 5
A
268 273parallel
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