Analysis of interatomic Contacts of Structural Units in PDB entry:
5ERO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ERO entry

There are 3 chains in PDB entry 5ERO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 413VAL 719
B
 HIS 414LEU 716
C
 ILE 415LEU 717
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 5ERO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
414 430Right-handed alpha
Helix 2
AA2
A
436 450Right-handed alpha
Helix 3
AA3
A
452 478Right-handed alpha
Helix 4
AA4
A
489 492Right-handed 310
Helix 5
AA5
A
494 517Right-handed alpha
Helix 6
AA6
A
524 546Right-handed alpha
Helix 7
AA7
A
550 562Right-handed alpha
Helix 8
AA8
A
562 575Right-handed alpha
Helix 9
AA9
A
586 612Right-handed alpha
Helix 10
AB1
A
612 620Right-handed alpha
Helix 11
AB2
A
622 628Right-handed alpha
Helix 12
AB3
A
631 639Right-handed alpha
Helix 13
AB4
A
644 658Right-handed alpha
Helix 14
AB5
A
661 676Right-handed alpha
Helix 15
AB6
A
676 703Right-handed alpha
Helix 16
AB7
A
707 716Right-handed alpha
Helix 17
AB8
B
415 431Right-handed alpha
Helix 18
AB9
B
436 450Right-handed alpha
Helix 19
AC1
B
452 478Right-handed alpha
Helix 20
AC2
B
489 492Right-handed 310
Helix 21
AC3
B
493 517Right-handed alpha
Helix 22
AC4
B
527 546Right-handed alpha
Helix 23
AC5
B
550 562Right-handed alpha
Helix 24
AC6
B
562 576Right-handed alpha
Helix 25
AC7
B
584 612Right-handed alpha
Helix 26
AC8
B
612 620Right-handed alpha
Helix 27
AC9
B
622 628Right-handed alpha
Helix 28
AD1
B
631 639Right-handed alpha
Helix 29
AD2
B
644 657Right-handed alpha
Helix 30
AD3
B
661 676Right-handed alpha
Helix 31
AD4
B
676 703Right-handed alpha
Helix 32
AD5
B
707 715Right-handed alpha
Helix 33
AD6
C
416 431Right-handed alpha
Helix 34
AD7
C
437 450Right-handed alpha
Helix 35
AD8
C
452 478Right-handed alpha
Helix 36
AD9
C
489 492Right-handed 310
Helix 37
AE1
C
493 517Right-handed alpha
Helix 38
AE2
C
519 545Right-handed alpha
Helix 39
AE3
C
550 562Right-handed alpha
Helix 40
AE4
C
562 575Right-handed alpha
Helix 41
AE5
C
588 612Right-handed alpha
Helix 42
AE6
C
622 628Right-handed alpha
Helix 43
AE7
C
631 638Right-handed alpha
Helix 44
AE8
C
644 657Right-handed alpha
Helix 45
AE9
C
661 675Right-handed alpha
Helix 46
AF1
C
676 704Right-handed alpha
Helix 47
AF2
C
707 715Right-handed alpha
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There are 3 sheets in PDB entry 5ERO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
486 487anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
482 483first strand
Strand 2
B
486 487anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
482 483first strand
Strand 2
C
486 487anti-parallel
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