Analysis of interatomic Contacts of Structural Units in PDB entry:
5ES6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ES6 entry

There is 1 chain in PDB entry 5ES6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5ES6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 24Right-handed alpha
Helix 2
AA2
A
39 43Right-handed 310
Helix 3
AA3
A
58 65Right-handed alpha
Helix 4
AA4
A
84 92Right-handed alpha
Helix 5
AA5
A
125 150Right-handed alpha
Helix 6
AA6
A
166 174Right-handed 310
Helix 7
AA7
A
180 192Right-handed alpha
Helix 8
AA8
A
204 216Right-handed alpha
Helix 9
AA9
A
231 248Right-handed alpha
Helix 10
AB1
A
263 277Right-handed alpha
Helix 11
AB2
A
288 299Right-handed alpha
Helix 12
AB3
A
310 315Right-handed 310
Helix 13
AB4
A
325 329Right-handed 310
Helix 14
AB5
A
365 380Right-handed alpha
Helix 15
AB6
A
396 407Right-handed alpha
Helix 16
AB7
A
416 420Right-handed 310
Helix 17
AB8
A
422 434Right-handed alpha
Helix 18
AB9
A
442 449Right-handed alpha
Helix 19
AC1
A
483 487Right-handed 310
Helix 20
AC2
A
545 552Right-handed alpha
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There are 8 sheets in PDB entry 5ES6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
3 7parallel
Strand 3
A
47 51parallel
Strand 4
A
69 73parallel
Strand 5
A
97 102anti-parallel
Strand 6
A
112 117anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
A
164 165parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 230first strand
Strand 2
A
220 224anti-parallel
Strand 3
A
411 414parallel
Strand 4
A
386 389parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 282first strand
Strand 2
A
255 259parallel
Strand 3
A
303 306parallel
Strand 4
A
319 322parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 351first strand
Strand 2
A
359 364anti-parallel
Strand 3
A
541 542anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 441first strand
Strand 2
A
458 462parallel
Strand 3
A
476 481parallel
Strand 4
A
491 495anti-parallel
Strand 5
A
506 507anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 516first strand
Strand 2
A
529 535anti-parallel
Strand 3
A
562 572anti-parallel
Strand 4
A
553 555anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 516first strand
Strand 2
A
529 535anti-parallel
Strand 3
A
562 572anti-parallel
Strand 4
A
578 583anti-parallel
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