Analysis of interatomic Contacts of Structural Units in PDB entry:
5ESP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ESP entry

There are 6 chains in PDB entry 5ESP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 7ARG 298
B
 LYS 7ARG 298
G
 C 1 C 27
H
 G 1 G 27
C
 C 1 C 26
D
 G 1 G 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5ESP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 20Right-handed alpha
Helix 2
AA2
A
51 63Right-handed alpha
Helix 3
AA3
A
81 93Right-handed alpha
Helix 4
AA4
A
100 117Right-handed alpha
Helix 5
AA5
A
118 121Right-handed 310
Helix 6
AA6
A
122 134Right-handed alpha
Helix 7
AA7
A
141 148Right-handed alpha
Helix 8
AA8
A
166 177Right-handed alpha
Helix 9
AA9
A
208 220Right-handed alpha
Helix 10
AB1
A
238 245Right-handed alpha
Helix 11
AB2
A
245 253Right-handed alpha
Helix 12
AB3
A
258 275Right-handed alpha
Helix 13
AB4
A
276 279Right-handed 310
Helix 14
AB5
A
280 292Right-handed alpha
Helix 15
AB6
B
9 20Right-handed alpha
Helix 16
AB7
B
48 50Right-handed 310
Helix 17
AB8
B
51 63Right-handed alpha
Helix 18
AB9
B
81 93Right-handed alpha
Helix 19
AC1
B
100 117Right-handed alpha
Helix 20
AC2
B
118 121Right-handed 310
Helix 21
AC3
B
122 134Right-handed alpha
Helix 22
AC4
B
141 148Right-handed alpha
Helix 23
AC5
B
166 177Right-handed alpha
Helix 24
AC6
B
208 220Right-handed alpha
Helix 25
AC7
B
238 245Right-handed alpha
Helix 26
AC8
B
245 253Right-handed alpha
Helix 27
AC9
B
258 275Right-handed alpha
Helix 28
AD1
B
276 279Right-handed 310
Helix 29
AD2
B
280 292Right-handed alpha
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There are 4 sheets in PDB entry 5ESP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 29first strand
Strand 2
A
37 48anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
66 69anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 186first strand
Strand 2
A
194 205anti-parallel
Strand 3
A
231 236anti-parallel
Strand 4
A
223 227anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 29first strand
Strand 2
B
37 47anti-parallel
Strand 3
B
74 79anti-parallel
Strand 4
B
66 70anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 183first strand
Strand 2
B
197 205anti-parallel
Strand 3
B
231 236anti-parallel
Strand 4
B
223 227anti-parallel
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