Analysis of interatomic Contacts of Structural Units in PDB entry:
5ESW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ESW entry

There are 2 chains in PDB entry 5ESW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1SER 188
B
 HIS 0SER 188
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5ESW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 14Right-handed alpha
Helix 2
AA2
A
20 39Right-handed alpha
Helix 3
AA3
A
52 61Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
111 124Right-handed alpha
Helix 6
AA6
B
2 14Right-handed alpha
Helix 7
AA7
B
20 39Right-handed alpha
Helix 8
AA8
B
52 61Right-handed alpha
Helix 9
AA9
B
93 97Right-handed 310
Helix 10
AB1
B
111 124Right-handed alpha
Helix 11
AB2
B
182 186Right-handed 310
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There are 4 sheets in PDB entry 5ESW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
177 180anti-parallel
Strand 3
A
161 162anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 90first strand
Strand 2
A
68 75anti-parallel
Strand 3
A
44 48parallel
Strand 4
A
100 108parallel
Strand 5
A
128 137parallel
Strand 6
A
151 156parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 19first strand
Strand 2
B
177 180anti-parallel
Strand 3
B
161 162anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 90first strand
Strand 2
B
68 75anti-parallel
Strand 3
B
44 48parallel
Strand 4
B
100 108parallel
Strand 5
B
128 137parallel
Strand 6
B
151 156parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il