Analysis of interatomic Contacts of Structural Units in PDB entry:
5ETZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ETZ entry

There are 3 chains in PDB entry 5ETZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 18ILE 278
B
 GLU 18SER 277
D
 GLU 18SER 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5ETZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 29Right-handed alpha
Helix 2
AA2
A
31 56Right-handed alpha
Helix 3
AA3
A
61 87Right-handed alpha
Helix 4
AA4
A
122 142Right-handed alpha
Helix 5
AA5
A
145 169Right-handed alpha
Helix 6
AA6
A
172 196Right-handed alpha
Helix 7
AA7
A
196 206Right-handed alpha
Helix 8
AA8
A
207 232Right-handed alpha
Helix 9
AA9
A
240 256Right-handed alpha
Helix 10
AB1
A
256 268Right-handed alpha
Helix 11
AB2
A
270 275Right-handed alpha
Helix 12
AB3
B
20 29Right-handed alpha
Helix 13
AB4
B
31 56Right-handed alpha
Helix 14
AB5
B
61 87Right-handed alpha
Helix 15
AB6
B
121 142Right-handed alpha
Helix 16
AB7
B
145 169Right-handed alpha
Helix 17
AB8
B
172 196Right-handed alpha
Helix 18
AB9
B
196 205Right-handed alpha
Helix 19
AC1
B
207 232Right-handed alpha
Helix 20
AC2
B
240 256Right-handed alpha
Helix 21
AC3
B
256 270Right-handed alpha
Helix 22
AC4
B
270 276Right-handed alpha
Helix 23
AC5
D
20 29Right-handed alpha
Helix 24
AC6
D
31 56Right-handed alpha
Helix 25
AC7
D
61 87Right-handed alpha
Helix 26
AC8
D
121 143Right-handed alpha
Helix 27
AC9
D
145 169Right-handed alpha
Helix 28
AD1
D
172 196Right-handed alpha
Helix 29
AD2
D
196 206Right-handed alpha
Helix 30
AD3
D
207 232Right-handed alpha
Helix 31
AD4
D
240 256Right-handed alpha
Helix 32
AD5
D
256 268Right-handed alpha
Helix 33
AD6
D
270 275Right-handed alpha
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There are 4 sheets in PDB entry 5ETZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
117 119anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
117 119anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 94first strand
Strand 2
D
117 119anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
106 109first strand
Strand 2
D
112 115anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il