Analysis of interatomic Contacts of Structural Units in PDB entry:
5EU9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5EU9 entry

There are 8 chains in PDB entry 5EU9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LEU 434
B	SER 2	LEU 434
C	SER 2	HIS 437
D	SER 2	LEU 434
E	SER 2	LEU 434
F	SER 2	HIS 435
G	SER 2	LEU 434
H	SER 2	LEU 434

There are163 helices in PDB entry 5EU9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	60	Right-handed 310
Helix 2	AA2	A	62	72	Right-handed alpha
Helix 3	AA3	A	72	80	Right-handed alpha
Helix 4	AA4	A	86	99	Right-handed alpha
Helix 5	AA5	A	107	126	Right-handed alpha
Helix 6	AA6	A	129	139	Right-handed alpha
Helix 7	AA7	A	177	201	Right-handed alpha
Helix 8	AA8	A	219	235	Right-handed alpha
Helix 9	AA9	A	247	250	Right-handed 310
Helix 10	AB1	A	272	287	Right-handed alpha
Helix 11	AB2	A	300	310	Right-handed alpha
Helix 12	AB3	A	324	334	Right-handed alpha
Helix 13	AB4	A	343	348	Right-handed alpha
Helix 14	AB5	A	349	363	Right-handed alpha
Helix 15	AB6	A	379	388	Right-handed alpha
Helix 16	AB7	A	400	418	Right-handed alpha
Helix 17	AB8	A	419	421	Right-handed 310
Helix 18	AB9	A	424	428	Right-handed 310
Helix 19	AC1	A	430	434	Right-handed 310
Helix 20	AC2	B	56	60	Right-handed 310
Helix 21	AC3	B	62	72	Right-handed alpha
Helix 22	AC4	B	72	81	Right-handed alpha
Helix 23	AC5	B	86	99	Right-handed alpha
Helix 24	AC6	B	107	126	Right-handed alpha
Helix 25	AC7	B	129	139	Right-handed alpha
Helix 26	AC8	B	177	201	Right-handed alpha
Helix 27	AC9	B	219	234	Right-handed alpha
Helix 28	AD1	B	247	250	Right-handed 310
Helix 29	AD2	B	266	270	Right-handed 310
Helix 30	AD3	B	272	287	Right-handed alpha
Helix 31	AD4	B	300	310	Right-handed alpha
Helix 32	AD5	B	324	335	Right-handed alpha
Helix 33	AD6	B	343	348	Right-handed alpha
Helix 34	AD7	B	349	363	Right-handed alpha
Helix 35	AD8	B	379	388	Right-handed alpha
Helix 36	AD9	B	400	418	Right-handed alpha
Helix 37	AE1	B	419	421	Right-handed 310
Helix 38	AE2	B	424	428	Right-handed 310
Helix 39	AE3	B	430	434	Right-handed 310
Helix 40	AE4	C	56	60	Right-handed 310
Helix 41	AE5	C	62	72	Right-handed alpha
Helix 42	AE6	C	72	81	Right-handed alpha
Helix 43	AE7	C	86	99	Right-handed alpha
Helix 44	AE8	C	107	126	Right-handed alpha
Helix 45	AE9	C	129	139	Right-handed alpha
Helix 46	AF1	C	177	201	Right-handed alpha
Helix 47	AF2	C	202	205	Right-handed 310
Helix 48	AF3	C	219	235	Right-handed alpha
Helix 49	AF4	C	247	250	Right-handed 310
Helix 50	AF5	C	266	270	Right-handed 310
Helix 51	AF6	C	272	287	Right-handed alpha
Helix 52	AF7	C	300	309	Right-handed alpha
Helix 53	AF8	C	324	335	Right-handed alpha
Helix 54	AF9	C	343	348	Right-handed alpha
Helix 55	AG1	C	349	363	Right-handed alpha
Helix 56	AG2	C	379	388	Right-handed alpha
Helix 57	AG3	C	400	418	Right-handed alpha
Helix 58	AG4	C	419	421	Right-handed 310
Helix 59	AG5	C	424	428	Right-handed 310
Helix 60	AG6	C	430	434	Right-handed 310
Helix 61	AG7	D	56	60	Right-handed 310
Helix 62	AG8	D	62	72	Right-handed alpha
Helix 63	AG9	D	72	81	Right-handed alpha
Helix 64	AH1	D	86	99	Right-handed alpha
Helix 65	AH2	D	107	126	Right-handed alpha
Helix 66	AH3	D	129	139	Right-handed alpha
Helix 67	AH4	D	177	201	Right-handed alpha
Helix 68	AH5	D	202	205	Right-handed 310
Helix 69	AH6	D	219	235	Right-handed alpha
Helix 70	AH7	D	247	250	Right-handed 310
Helix 71	AH8	D	266	270	Right-handed 310
Helix 72	AH9	D	272	287	Right-handed alpha
Helix 73	AI1	D	300	310	Right-handed alpha
Helix 74	AI2	D	324	334	Right-handed alpha
Helix 75	AI3	D	343	348	Right-handed alpha
Helix 76	AI4	D	349	363	Right-handed alpha
Helix 77	AI5	D	379	388	Right-handed alpha
Helix 78	AI6	D	400	418	Right-handed alpha
Helix 79	AI7	D	419	421	Right-handed 310
Helix 80	AI8	D	424	428	Right-handed 310
Helix 81	AI9	D	430	434	Right-handed 310
Helix 82	AJ1	E	56	60	Right-handed 310
Helix 83	AJ2	E	62	72	Right-handed alpha
Helix 84	AJ3	E	72	81	Right-handed alpha
Helix 85	AJ4	E	86	99	Right-handed alpha
Helix 86	AJ5	E	107	126	Right-handed alpha
Helix 87	AJ6	E	129	139	Right-handed alpha
Helix 88	AJ7	E	177	201	Right-handed alpha
Helix 89	AJ8	E	219	234	Right-handed alpha
Helix 90	AJ9	E	247	250	Right-handed 310
Helix 91	AK1	E	266	270	Right-handed 310
Helix 92	AK2	E	272	287	Right-handed alpha
Helix 93	AK3	E	300	310	Right-handed alpha
Helix 94	AK4	E	324	335	Right-handed alpha
Helix 95	AK5	E	343	348	Right-handed alpha
Helix 96	AK6	E	349	363	Right-handed alpha
Helix 97	AK7	E	379	388	Right-handed alpha
Helix 98	AK8	E	400	418	Right-handed alpha
Helix 99	AK9	E	419	421	Right-handed 310
Helix 100	AL1	E	424	428	Right-handed 310
Helix 101	AL2	E	430	434	Right-handed 310
Helix 102	AL3	F	56	60	Right-handed 310
Helix 103	AL4	F	62	72	Right-handed alpha
Helix 104	AL5	F	72	79	Right-handed alpha
Helix 105	AL6	F	86	99	Right-handed alpha
Helix 106	AL7	F	107	126	Right-handed alpha
Helix 107	AL8	F	129	139	Right-handed alpha
Helix 108	AL9	F	177	201	Right-handed alpha
Helix 109	AM1	F	202	205	Right-handed 310
Helix 110	AM2	F	219	235	Right-handed alpha
Helix 111	AM3	F	247	250	Right-handed 310
Helix 112	AM4	F	272	287	Right-handed alpha
Helix 113	AM5	F	300	310	Right-handed alpha
Helix 114	AM6	F	324	334	Right-handed alpha
Helix 115	AM7	F	343	348	Right-handed alpha
Helix 116	AM8	F	349	363	Right-handed alpha
Helix 117	AM9	F	379	388	Right-handed alpha
Helix 118	AN1	F	400	418	Right-handed alpha
Helix 119	AN2	F	419	421	Right-handed 310
Helix 120	AN3	F	424	428	Right-handed 310
Helix 121	AN4	F	430	434	Right-handed 310
Helix 122	AN5	G	56	60	Right-handed 310
Helix 123	AN6	G	62	72	Right-handed alpha
Helix 124	AN7	G	72	81	Right-handed alpha
Helix 125	AN8	G	86	99	Right-handed alpha
Helix 126	AN9	G	107	126	Right-handed alpha
Helix 127	AO1	G	129	139	Right-handed alpha
Helix 128	AO2	G	177	201	Right-handed alpha
Helix 129	AO3	G	202	205	Right-handed 310
Helix 130	AO4	G	219	234	Right-handed alpha
Helix 131	AO5	G	247	250	Right-handed 310
Helix 132	AO6	G	266	270	Right-handed 310
Helix 133	AO7	G	272	287	Right-handed alpha
Helix 134	AO8	G	300	309	Right-handed alpha
Helix 135	AO9	G	324	334	Right-handed alpha
Helix 136	AP1	G	343	348	Right-handed alpha
Helix 137	AP2	G	349	363	Right-handed alpha
Helix 138	AP3	G	379	388	Right-handed alpha
Helix 139	AP4	G	400	418	Right-handed alpha
Helix 140	AP5	G	419	421	Right-handed 310
Helix 141	AP6	G	424	428	Right-handed 310
Helix 142	AP7	G	430	434	Right-handed 310
Helix 143	AP8	H	56	60	Right-handed 310
Helix 144	AP9	H	62	72	Right-handed alpha
Helix 145	AQ1	H	72	80	Right-handed alpha
Helix 146	AQ2	H	86	99	Right-handed alpha
Helix 147	AQ3	H	107	126	Right-handed alpha
Helix 148	AQ4	H	129	139	Right-handed alpha
Helix 149	AQ5	H	177	201	Right-handed alpha
Helix 150	AQ6	H	202	205	Right-handed 310
Helix 151	AQ7	H	219	235	Right-handed alpha
Helix 152	AQ8	H	247	250	Right-handed 310
Helix 153	AQ9	H	266	270	Right-handed 310
Helix 154	AR1	H	272	287	Right-handed alpha
Helix 155	AR2	H	300	310	Right-handed alpha
Helix 156	AR3	H	324	335	Right-handed alpha
Helix 157	AR4	H	343	348	Right-handed alpha
Helix 158	AR5	H	349	363	Right-handed alpha
Helix 159	AR6	H	379	388	Right-handed alpha
Helix 160	AR7	H	400	418	Right-handed alpha
Helix 161	AR8	H	419	421	Right-handed 310
Helix 162	AR9	H	424	428	Right-handed 310
Helix 163	AS1	H	430	434	Right-handed 310

There are 24 sheets in PDB entry 5EU9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	12	first strand
Strand 2	A	18	26	anti-parallel
Strand 3	A	29	34	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	392	394	parallel
Strand 3	A	366	370	parallel
Strand 4	A	339	342	parallel
Strand 5	A	314	317	parallel
Strand 6	A	289	293	parallel
Strand 7	A	241	245	parallel
Strand 8	A	167	171	anti-parallel
Strand 9	A	150	154	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	253	first strand
Strand 2	A	256	257	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	12	first strand
Strand 2	B	18	26	anti-parallel
Strand 3	B	29	34	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	148	first strand
Strand 2	B	392	394	parallel
Strand 3	B	366	370	parallel
Strand 4	B	339	342	parallel
Strand 5	B	314	317	parallel
Strand 6	B	289	293	parallel
Strand 7	B	241	245	parallel
Strand 8	B	167	171	anti-parallel
Strand 9	B	150	154	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	253	first strand
Strand 2	B	256	257	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	5	12	first strand
Strand 2	C	18	26	anti-parallel
Strand 3	C	29	34	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	148	first strand
Strand 2	C	392	394	parallel
Strand 3	C	366	370	parallel
Strand 4	C	339	342	parallel
Strand 5	C	314	317	parallel
Strand 6	C	289	293	parallel
Strand 7	C	241	245	parallel
Strand 8	C	167	171	anti-parallel
Strand 9	C	150	154	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	253	first strand
Strand 2	C	256	257	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	5	12	first strand
Strand 2	D	18	26	anti-parallel
Strand 3	D	29	34	anti-parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	148	first strand
Strand 2	D	392	394	parallel
Strand 3	D	366	370	parallel
Strand 4	D	339	342	parallel
Strand 5	D	314	317	parallel
Strand 6	D	289	293	parallel
Strand 7	D	241	245	parallel
Strand 8	D	167	171	anti-parallel
Strand 9	D	150	154	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	253	first strand
Strand 2	D	256	257	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	12	first strand
Strand 2	E	18	26	anti-parallel
Strand 3	E	29	34	anti-parallel

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There are 9 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	147	148	first strand
Strand 2	E	392	394	parallel
Strand 3	E	366	370	parallel
Strand 4	E	339	342	parallel
Strand 5	E	314	317	parallel
Strand 6	E	289	293	parallel
Strand 7	E	241	245	parallel
Strand 8	E	167	171	anti-parallel
Strand 9	E	150	154	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	252	253	first strand
Strand 2	E	256	257	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	12	first strand
Strand 2	F	18	26	anti-parallel
Strand 3	F	29	34	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	148	first strand
Strand 2	F	392	394	parallel
Strand 3	F	366	370	parallel
Strand 4	F	339	342	parallel
Strand 5	F	314	317	parallel
Strand 6	F	289	293	parallel
Strand 7	F	241	245	parallel
Strand 8	F	167	171	anti-parallel
Strand 9	F	150	154	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	252	253	first strand
Strand 2	F	256	257	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	12	first strand
Strand 2	G	18	26	anti-parallel
Strand 3	G	29	34	anti-parallel

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There are 9 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	147	148	first strand
Strand 2	G	392	394	parallel
Strand 3	G	366	370	parallel
Strand 4	G	339	342	parallel
Strand 5	G	314	317	parallel
Strand 6	G	289	293	parallel
Strand 7	G	241	245	parallel
Strand 8	G	167	171	anti-parallel
Strand 9	G	150	154	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	252	253	first strand
Strand 2	G	256	257	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	5	12	first strand
Strand 2	H	18	26	anti-parallel
Strand 3	H	29	34	anti-parallel

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There are 9 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	147	148	first strand
Strand 2	H	392	394	parallel
Strand 3	H	366	370	parallel
Strand 4	H	339	342	parallel
Strand 5	H	314	317	parallel
Strand 6	H	289	293	parallel
Strand 7	H	241	245	parallel
Strand 8	H	167	171	anti-parallel
Strand 9	H	150	154	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	252	253	first strand
Strand 2	H	256	257	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5EU9

Analysis of interatomic Contacts of Structural Units in PDB entry:
5EU9