Analysis of interatomic Contacts of Structural Units in PDB entry:
5EUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EUH entry

There are 4 chains in PDB entry 5EUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 339ALA 502
B
 ALA 339ALA 502
C
 ALA 340ALA 502
D
 ALA 340ALA 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5EUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
349 368Right-handed alpha
Helix 2
AA2
A
380 389Right-handed alpha
Helix 3
AA3
A
389 408Right-handed alpha
Helix 4
AA4
A
431 448Right-handed alpha
Helix 5
AA5
A
448 453Right-handed alpha
Helix 6
AA6
A
475 493Right-handed alpha
Helix 7
AA7
B
349 368Right-handed alpha
Helix 8
AA8
B
380 389Right-handed alpha
Helix 9
AA9
B
389 406Right-handed alpha
Helix 10
AB1
B
431 448Right-handed alpha
Helix 11
AB2
B
448 453Right-handed alpha
Helix 12
AB3
B
475 493Right-handed alpha
Helix 13
AB4
C
349 368Right-handed alpha
Helix 14
AB5
C
393 408Right-handed alpha
Helix 15
AB6
C
431 443Right-handed alpha
Helix 16
AB7
C
475 489Right-handed alpha
Helix 17
AB8
C
489 494Right-handed alpha
Helix 18
AB9
D
349 368Right-handed alpha
Helix 19
AC1
D
384 406Right-handed alpha
Helix 20
AC2
D
431 447Right-handed alpha
Helix 21
AC3
D
475 489Right-handed alpha
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There are 4 sheets in PDB entry 5EUH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 416first strand
Strand 2
A
422 428anti-parallel
Strand 3
A
371 378anti-parallel
Strand 4
A
461 468anti-parallel
Strand 5
A
498 500parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
413 419first strand
Strand 2
B
422 428anti-parallel
Strand 3
B
371 378anti-parallel
Strand 4
B
461 468anti-parallel
Strand 5
B
498 500parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
423 428first strand
Strand 2
C
371 376anti-parallel
Strand 3
C
463 468anti-parallel
Strand 4
C
498 500parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
423 428first strand
Strand 2
D
371 376anti-parallel
Strand 3
D
463 468anti-parallel
Strand 4
D
498 499parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il