Analysis of interatomic Contacts of Structural Units in PDB entry:
5EUL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EUL entry

There are 4 chains in PDB entry 5EUL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14ALA 825
Y
 ASP 13LYS 430
E
 GLN 2LEU 57
V
 GLN 1SER 116
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 52 helices in PDB entry 5EUL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
30 35Right-handed alpha
Helix 3
AA3
A
36 54Right-handed alpha
Helix 4
AA4
A
57 77Right-handed alpha
Helix 5
AA5
A
82 94Right-handed alpha
Helix 6
AA6
A
105 119Right-handed alpha
Helix 7
AA7
A
130 148Right-handed alpha
Helix 8
AA8
A
160 170Right-handed alpha
Helix 9
AA9
A
177 188Right-handed alpha
Helix 10
AB1
A
192 196Right-handed 310
Helix 11
AB2
A
208 214Right-handed alpha
Helix 12
AB3
A
233 241Right-handed alpha
Helix 13
AB4
A
262 273Right-handed alpha
Helix 14
AB5
A
280 284Right-handed 310
Helix 15
AB6
A
285 299Right-handed alpha
Helix 16
AB7
A
332 341Right-handed alpha
Helix 17
AB8
A
356 362Right-handed alpha
Helix 18
AB9
A
373 376Right-handed 310
Helix 19
AC1
A
377 384Right-handed alpha
Helix 20
AC2
A
411 428Right-handed alpha
Helix 21
AC3
A
438 451Right-handed alpha
Helix 22
AC4
A
466 475Right-handed alpha
Helix 23
AC5
A
485 488Right-handed 310
Helix 24
AC6
A
499 503Right-handed 310
Helix 25
AC7
A
515 525Right-handed alpha
Helix 26
AC8
A
543 548Right-handed alpha
Helix 27
AC9
A
553 561Right-handed alpha
Helix 28
AD1
A
571 619Right-handed alpha
Helix 29
AD2
A
626 642Right-handed alpha
Helix 30
AD3
A
685 699Right-handed alpha
Helix 31
AD4
A
707 737Right-handed alpha
Helix 32
AD5
A
751 770Right-handed alpha
Helix 33
AD6
A
796 824Right-handed alpha
Helix 34
AD7
Y
14 31Right-handed alpha
Helix 35
AD8
Y
32 34Right-handed 310
Helix 36
AD9
Y
40 45Right-handed alpha
Helix 37
AE1
Y
74 89Right-handed alpha
Helix 38
AE2
Y
92 100Right-handed alpha
Helix 39
AE3
Y
103 136Right-handed alpha
Helix 40
AE4
Y
147 171Right-handed alpha
Helix 41
AE5
Y
177 189Right-handed alpha
Helix 42
AE6
Y
191 197Right-handed alpha
Helix 43
AE7
Y
216 236Right-handed alpha
Helix 44
AE8
Y
275 289Right-handed alpha
Helix 45
AE9
Y
290 293Right-handed 310
Helix 46
AF1
Y
308 331Right-handed alpha
Helix 47
AF2
Y
334 343Right-handed alpha
Helix 48
AF3
Y
353 386Right-handed alpha
Helix 49
AF4
Y
399 421Right-handed alpha
Helix 50
AF5
E
3 18Right-handed alpha
Helix 51
AF6
E
23 55Right-handed alpha
Helix 52
AF7
V
86 90Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 5EUL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
172 176parallel
Strand 3
A
124 128parallel
Strand 4
A
203 207parallel
Strand 5
A
367 371parallel
Strand 6
A
97 99parallel
Strand 7
A
389 391parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 226first strand
Strand 2
A
349 355anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
312 316anti-parallel
Strand 3
A
323 324anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
534 540parallel
Strand 3
A
406 408parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
534 540parallel
Strand 3
A
506 509parallel
Strand 4
A
432 435parallel
Strand 5
A
480 483parallel
Strand 6
A
457 459parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Y
238 242first strand
Strand 2
Y
261 265anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
5 7first strand
Strand 2
V
18 24anti-parallel
Strand 3
V
76 82anti-parallel
Strand 4
V
67 72anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
11 12first strand
Strand 2
V
111 115parallel
Strand 3
V
91 98anti-parallel
Strand 4
V
33 37anti-parallel
Strand 5
V
47 52anti-parallel
Strand 6
V
57 58anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il