Analysis of interatomic Contacts of Structural Units in PDB entry:
5EUN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EUN entry

There are 2 chains in PDB entry 5EUN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 262
A
 ILE 264LEU 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5EUN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 7Right-handed 310
Helix 2
AA2
A
8 14Right-handed alpha
Helix 3
AA3
A
42 46Right-handed 310
Helix 4
AA4
A
64 72Right-handed alpha
Helix 5
AA5
A
80 96Right-handed alpha
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
116 129Right-handed alpha
Helix 8
AA8
A
142 150Right-handed alpha
Helix 9
AA9
A
151 153Right-handed 310
Helix 10
AB1
A
167 176Right-handed alpha
Helix 11
AB2
A
177 178Right-handed 310
Helix 12
AB3
A
179 189Right-handed 310
Helix 13
AB4
A
209 223Right-handed alpha
Helix 14
AB5
A
246 250Right-handed 310
Helix 15
AB6
A
278 290Right-handed alpha
Helix 16
AB7
A
296 341Right-handed alpha
Helix 17
AB8
A
366 372Right-handed alpha
Helix 18
AB9
A
372 377Right-handed alpha
Helix 19
AC1
A
385 388Right-handed 310
Helix 20
AC2
A
406 425Right-handed alpha
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There are 4 sheets in PDB entry 5EUN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
61 63anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 114first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
255 260anti-parallel
Strand 4
A
226 230parallel
Strand 5
A
193 196parallel
Strand 6
A
134 137parallel
Strand 7
A
155 158parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
165 166anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
355 360anti-parallel
Strand 3
A
397 401anti-parallel
Strand 4
A
382 383anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il