Analysis of interatomic Contacts of Structural Units in PDB entry:
5EUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EUX entry

There is 1 chain in PDB entry 5EUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 506ALA 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5EUX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
543 553Right-handed alpha
Helix 2
AA2
A
653 669Right-handed alpha
Helix 3
AA3
A
680 690Right-handed alpha
Helix 4
AA4
A
695 700Right-handed 310
Helix 5
AA5
A
705 713Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5EUX.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
520 522first strand
Strand 2
A
508 513anti-parallel
Strand 3
A
535 540anti-parallel
Strand 4
A
641 645parallel
Strand 5
A
673 677parallel
Strand 6
A
702 703parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il