Analysis of interatomic Contacts of Structural Units in PDB entry:
5EV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EV7 entry

There is 1 chain in PDB entry 5EV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 44TYR 525
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5EV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 64Right-handed alpha
Helix 2
AA2
A
160 171Right-handed alpha
Helix 3
AA3
A
189 197Right-handed alpha
Helix 4
AA4
A
202 220Right-handed alpha
Helix 5
AA5
A
227 231Right-handed 310
Helix 6
AA6
A
263 268Right-handed alpha
Helix 7
AA7
A
268 275Right-handed alpha
Helix 8
AA8
A
276 288Right-handed alpha
Helix 9
AA9
A
289 293Right-handed 310
Helix 10
AB1
A
301 313Right-handed alpha
Helix 11
AB2
A
317 322Right-handed alpha
Helix 12
AB3
A
323 329Right-handed alpha
Helix 13
AB4
A
336 341Right-handed alpha
Helix 14
AB5
A
342 358Right-handed alpha
Helix 15
AB6
A
360 371Right-handed alpha
Helix 16
AB7
A
372 377Right-handed 310
Helix 17
AB8
A
380 397Right-handed alpha
Helix 18
AB9
A
400 407Right-handed alpha
Helix 19
AC1
A
412 421Right-handed alpha
Helix 20
AC2
A
430 434Right-handed 310
Helix 21
AC3
A
470 477Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 5EV7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
140 146anti-parallel
Strand 3
A
83 90anti-parallel
Strand 4
A
117 123anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 114first strand
Strand 2
A
95 99anti-parallel
Strand 3
A
127 132anti-parallel
Strand 4
A
73 79anti-parallel
Strand 5
A
149 150anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 155first strand
Strand 2
A
177 180parallel
Strand 3
A
184 188anti-parallel
Strand 4
A
237 242parallel
Strand 5
A
255 259parallel
Strand 6
A
249 252anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
478 479anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 464first strand
Strand 2
A
514 524parallel
Strand 3
A
500 508anti-parallel
Strand 4
A
486 492anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il