Analysis of interatomic Contacts of Structural Units in PDB entry:
5EVM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EVM entry

There are 6 chains in PDB entry 5EVM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 27ASP 525
B
ILE 27ASP 482
C
ILE 27ASP 482
D
ILE 27ASP 482
E
ILE 27ASP 482
F
ILE 27ASP 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are115 helices in PDB entry 5EVM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
29 35Right-handed alpha
Helix 2
AA2
A
65 69Right-handed 310
Helix 3
AA3
A
74 99Right-handed alpha
Helix 4
AA4
A
117 121Right-handed alpha
Helix 5
AA5
A
125 146Right-handed alpha
Helix 6
AA6
A
147 154Right-handed alpha
Helix 7
AA7
A
175 182Right-handed alpha
Helix 8
AA8
A
183 187Right-handed 310
Helix 9
AA9
A
193 215Right-handed alpha
Helix 10
AB1
A
228 232Right-handed alpha
Helix 11
AB2
A
233 236Right-handed 310
Helix 12
AB3
A
238 245Right-handed alpha
Helix 13
AB4
A
252 259Right-handed alpha
Helix 14
AB5
A
328 331Right-handed 310
Helix 15
AB6
A
349 356Right-handed alpha
Helix 16
AB7
A
357 358Right-handed 310
Helix 17
AB8
A
359 363Right-handed 310
Helix 18
AB9
A
437 442Right-handed alpha
Helix 19
AC1
A
452 525Right-handed alpha
Helix 20
AC2
B
29 35Right-handed alpha
Helix 21
AC3
B
65 69Right-handed 310
Helix 22
AC4
B
74 99Right-handed alpha
Helix 23
AC5
B
117 121Right-handed alpha
Helix 24
AC6
B
125 146Right-handed alpha
Helix 25
AC7
B
147 154Right-handed alpha
Helix 26
AC8
B
175 182Right-handed alpha
Helix 27
AC9
B
183 187Right-handed 310
Helix 28
AD1
B
193 215Right-handed alpha
Helix 29
AD2
B
228 232Right-handed alpha
Helix 30
AD3
B
233 236Right-handed 310
Helix 31
AD4
B
238 245Right-handed alpha
Helix 32
AD5
B
252 259Right-handed alpha
Helix 33
AD6
B
328 331Right-handed 310
Helix 34
AD7
B
349 356Right-handed alpha
Helix 35
AD8
B
357 358Right-handed 310
Helix 36
AD9
B
359 363Right-handed 310
Helix 37
AE1
B
437 442Right-handed alpha
Helix 38
AE2
B
452 482Right-handed alpha
Helix 39
AE3
C
29 35Right-handed alpha
Helix 40
AE4
C
65 69Right-handed 310
Helix 41
AE5
C
74 99Right-handed alpha
Helix 42
AE6
C
117 121Right-handed alpha
Helix 43
AE7
C
125 146Right-handed alpha
Helix 44
AE8
C
147 154Right-handed alpha
Helix 45
AE9
C
175 182Right-handed alpha
Helix 46
AF1
C
183 187Right-handed 310
Helix 47
AF2
C
193 215Right-handed alpha
Helix 48
AF3
C
228 232Right-handed alpha
Helix 49
AF4
C
233 236Right-handed 310
Helix 50
AF5
C
238 246Right-handed alpha
Helix 51
AF6
C
252 259Right-handed alpha
Helix 52
AF7
C
328 331Right-handed 310
Helix 53
AF8
C
349 356Right-handed alpha
Helix 54
AF9
C
357 358Right-handed 310
Helix 55
AG1
C
359 363Right-handed 310
Helix 56
AG2
C
387 390Right-handed 310
Helix 57
AG3
C
437 442Right-handed alpha
Helix 58
AG4
C
452 482Right-handed alpha
Helix 59
AG5
D
29 36Right-handed alpha
Helix 60
AG6
D
65 69Right-handed 310
Helix 61
AG7
D
74 99Right-handed alpha
Helix 62
AG8
D
117 121Right-handed alpha
Helix 63
AG9
D
125 146Right-handed alpha
Helix 64
AH1
D
147 154Right-handed alpha
Helix 65
AH2
D
175 182Right-handed alpha
Helix 66
AH3
D
183 187Right-handed 310
Helix 67
AH4
D
193 215Right-handed alpha
Helix 68
AH5
D
228 232Right-handed alpha
Helix 69
AH6
D
233 236Right-handed 310
Helix 70
AH7
D
238 245Right-handed alpha
Helix 71
AH8
D
250 259Right-handed alpha
Helix 72
AH9
D
328 331Right-handed 310
Helix 73
AI1
D
349 356Right-handed alpha
Helix 74
AI2
D
357 358Right-handed 310
Helix 75
AI3
D
359 363Right-handed 310
Helix 76
AI4
D
437 442Right-handed alpha
Helix 77
AI5
D
452 482Right-handed alpha
Helix 78
AI6
E
29 36Right-handed alpha
Helix 79
AI7
E
65 69Right-handed 310
Helix 80
AI8
E
74 99Right-handed alpha
Helix 81
AI9
E
117 121Right-handed alpha
Helix 82
AJ1
E
125 146Right-handed alpha
Helix 83
AJ2
E
147 154Right-handed alpha
Helix 84
AJ3
E
175 182Right-handed alpha
Helix 85
AJ4
E
183 187Right-handed 310
Helix 86
AJ5
E
193 215Right-handed alpha
Helix 87
AJ6
E
228 232Right-handed alpha
Helix 88
AJ7
E
233 236Right-handed 310
Helix 89
AJ8
E
238 246Right-handed alpha
Helix 90
AJ9
E
253 259Right-handed alpha
Helix 91
AK1
E
328 331Right-handed 310
Helix 92
AK2
E
349 356Right-handed alpha
Helix 93
AK3
E
357 358Right-handed 310
Helix 94
AK4
E
359 363Right-handed 310
Helix 95
AK5
E
437 442Right-handed alpha
Helix 96
AK6
E
452 482Right-handed alpha
Helix 97
AK7
F
29 36Right-handed alpha
Helix 98
AK8
F
65 69Right-handed 310
Helix 99
AK9
F
74 99Right-handed alpha
Helix 100
AL1
F
117 121Right-handed alpha
Helix 101
AL2
F
125 146Right-handed alpha
Helix 102
AL3
F
147 154Right-handed alpha
Helix 103
AL4
F
175 182Right-handed alpha
Helix 104
AL5
F
183 187Right-handed 310
Helix 105
AL6
F
193 215Right-handed alpha
Helix 106
AL7
F
228 232Right-handed alpha
Helix 107
AL8
F
233 236Right-handed 310
Helix 108
AL9
F
238 246Right-handed alpha
Helix 109
AM1
F
254 259Right-handed alpha
Helix 110
AM2
F
328 331Right-handed 310
Helix 111
AM3
F
349 356Right-handed alpha
Helix 112
AM4
F
357 358Right-handed 310
Helix 113
AM5
F
359 363Right-handed 310
Helix 114
AM6
F
437 442Right-handed alpha
Helix 115
AM7
F
452 482Right-handed alpha
Back to top of page

There are 31 sheets in PDB entry 5EVM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
332 333first strand
Strand 2
A
337 340anti-parallel
Strand 3
A
38 48parallel
Strand 4
A
286 298anti-parallel
Strand 5
A
315 319anti-parallel
Strand 6
A
322 326anti-parallel
Strand 7
A
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
158 161first strand
Strand 2
A
169 173anti-parallel
Strand 3
A
53 60parallel
Strand 4
A
275 282anti-parallel
Strand 5
A
263 270anti-parallel
Strand 6
A
226 227anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 103first strand
Strand 2
A
113 116anti-parallel
Strand 3
C
427 428parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
122 124first strand
Strand 2
C
376 379anti-parallel
Strand 3
C
382 385anti-parallel
Strand 4
C
410 412anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
301 302first strand
Strand 2
A
307 310anti-parallel
Strand 3
A
365 367anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
410 412first strand
Strand 2
A
382 385anti-parallel
Strand 3
A
376 379anti-parallel
Strand 4
B
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
392 394first strand
Strand 2
A
419 422anti-parallel
Strand 3
A
425 428anti-parallel
Strand 4
B
113 116parallel
Strand 5
B
101 103anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
158 161first strand
Strand 2
B
169 173anti-parallel
Strand 3
B
38 60parallel
Strand 4
B
275 298anti-parallel
Strand 5
B
337 340first strand
Strand 6
B
332 333anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
226 227first strand
Strand 2
B
263 270anti-parallel
Strand 3
B
275 298anti-parallel
Strand 4
B
38 60anti-parallel
Strand 5
B
315 319first strand
Strand 6
B
322 326anti-parallel
Strand 7
B
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
301 302first strand
Strand 2
B
307 310anti-parallel
Strand 3
B
365 367anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
410 412first strand
Strand 2
B
382 385anti-parallel
Strand 3
B
376 379anti-parallel
Strand 4
C
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
392 394first strand
Strand 2
B
419 422anti-parallel
Strand 3
B
426 428anti-parallel
Strand 4
C
113 116parallel
Strand 5
C
101 103anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
158 161first strand
Strand 2
C
169 173anti-parallel
Strand 3
C
38 60parallel
Strand 4
C
275 298anti-parallel
Strand 5
C
337 340first strand
Strand 6
C
332 333anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
226 227first strand
Strand 2
C
263 270anti-parallel
Strand 3
C
275 298anti-parallel
Strand 4
C
38 60anti-parallel
Strand 5
C
315 319first strand
Strand 6
C
322 326anti-parallel
Strand 7
C
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
301 302first strand
Strand 2
C
307 310anti-parallel
Strand 3
C
365 367anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
392 394first strand
Strand 2
C
420 422anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
332 333first strand
Strand 2
D
337 340anti-parallel
Strand 3
D
38 48parallel
Strand 4
D
286 298anti-parallel
Strand 5
D
315 319anti-parallel
Strand 6
D
322 326anti-parallel
Strand 7
D
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
158 162first strand
Strand 2
D
168 173anti-parallel
Strand 3
D
53 60parallel
Strand 4
D
275 282anti-parallel
Strand 5
D
263 270anti-parallel
Strand 6
D
226 227anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
101 103first strand
Strand 2
D
113 116anti-parallel
Strand 3
F
425 428parallel
Strand 4
F
420 422anti-parallel
Strand 5
F
392 393anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
123 124first strand
Strand 2
F
376 379anti-parallel
Strand 3
F
382 385anti-parallel
Strand 4
F
410 412anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
301 302first strand
Strand 2
D
307 310anti-parallel
Strand 3
D
365 367anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
410 412first strand
Strand 2
D
382 385anti-parallel
Strand 3
D
376 379anti-parallel
Strand 4
E
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
392 393first strand
Strand 2
D
419 422anti-parallel
Strand 3
D
425 428anti-parallel
Strand 4
E
113 116parallel
Strand 5
E
101 103anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
332 333first strand
Strand 2
E
337 340anti-parallel
Strand 3
E
38 48parallel
Strand 4
E
286 298anti-parallel
Strand 5
E
315 319anti-parallel
Strand 6
E
322 326anti-parallel
Strand 7
E
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
158 162first strand
Strand 2
E
168 173anti-parallel
Strand 3
E
53 60parallel
Strand 4
E
275 282anti-parallel
Strand 5
E
263 270anti-parallel
Strand 6
E
226 227anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
301 302first strand
Strand 2
E
307 310anti-parallel
Strand 3
E
365 367anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
410 412first strand
Strand 2
E
382 385anti-parallel
Strand 3
E
376 379anti-parallel
Strand 4
F
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
392 394first strand
Strand 2
E
419 422anti-parallel
Strand 3
E
425 428anti-parallel
Strand 4
F
113 116parallel
Strand 5
F
101 103anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
158 160first strand
Strand 2
F
170 173anti-parallel
Strand 3
F
38 60parallel
Strand 4
F
275 298anti-parallel
Strand 5
F
337 340first strand
Strand 6
F
332 333anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
226 227first strand
Strand 2
F
263 270anti-parallel
Strand 3
F
275 298anti-parallel
Strand 4
F
38 60anti-parallel
Strand 5
F
315 319first strand
Strand 6
F
322 326anti-parallel
Strand 7
F
345 346anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
301 302first strand
Strand 2
F
307 310anti-parallel
Strand 3
F
365 367anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il