Analysis of interatomic Contacts of Structural Units in PDB entry:
5EVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EVY entry

There is 1 chain in PDB entry 5EVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 SER 2ALA 421
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5EVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
15 26Right-handed alpha
Helix 2
AA2
X
51 61Right-handed alpha
Helix 3
AA3
X
63 71Right-handed alpha
Helix 4
AA4
X
77 79Right-handed 310
Helix 5
AA5
X
108 118Right-handed alpha
Helix 6
AA6
X
164 174Right-handed alpha
Helix 7
AA7
X
195 205Right-handed alpha
Helix 8
AA8
X
208 213Right-handed 310
Helix 9
AA9
X
263 269Right-handed alpha
Helix 10
AB1
X
275 285Right-handed alpha
Helix 11
AB2
X
311 316Right-handed alpha
Helix 12
AB3
X
323 339Right-handed alpha
Helix 13
AB4
X
345 347Right-handed 310
Helix 14
AB5
X
348 378Right-handed alpha
Helix 15
AB6
X
388 397Right-handed alpha
Helix 16
AB7
X
400 405Right-handed alpha
Helix 17
AB8
X
407 413Right-handed alpha
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There are 4 sheets in PDB entry 5EVY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
30 34first strand
Strand 2
X
6 11parallel
Strand 3
X
155 158parallel
Strand 4
X
307 309parallel
Strand 5
X
303 304anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
48 49first strand
Strand 2
X
106 107anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
93 98first strand
Strand 2
X
81 87anti-parallel
Strand 3
X
216 220parallel
Strand 4
X
223 230anti-parallel
Strand 5
X
235 243anti-parallel
Strand 6
X
182 194anti-parallel
Strand 7
X
289 295anti-parallel
Strand 8
X
259 261anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
131 136first strand
Strand 2
X
141 145anti-parallel
Strand 3
X
150 153anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il