Analysis of interatomic Contacts of Structural Units in PDB entry:
5EW0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EW0 entry

There are 2 chains in PDB entry 5EW0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 41PRO 268
B
 ASN 41PRO 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5EW0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
81 96Right-handed alpha
Helix 2
AA2
A
109 114Right-handed alpha
Helix 3
AA3
A
115 122Right-handed alpha
Helix 4
AA4
A
130 151Right-handed alpha
Helix 5
AA5
A
220 235Right-handed alpha
Helix 6
AA6
A
254 267Right-handed alpha
Helix 7
AA7
B
81 96Right-handed alpha
Helix 8
AA8
B
109 114Right-handed alpha
Helix 9
AA9
B
115 122Right-handed alpha
Helix 10
AB1
B
130 151Right-handed alpha
Helix 11
AB2
B
173 176Right-handed 310
Helix 12
AB3
B
220 235Right-handed alpha
Helix 13
AB4
B
254 267Right-handed alpha
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There are 4 sheets in PDB entry 5EW0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 48first strand
Strand 2
A
51 56anti-parallel
Strand 3
A
62 68anti-parallel
Strand 4
A
73 76anti-parallel
Strand 5
A
100 104parallel
Strand 6
A
125 129parallel
Strand 7
A
164 166parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
177 180anti-parallel
Strand 3
A
192 195anti-parallel
Strand 4
A
200 202anti-parallel
Strand 5
A
242 244parallel
Strand 6
A
251 252anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 48first strand
Strand 2
B
51 56anti-parallel
Strand 3
B
62 68anti-parallel
Strand 4
B
73 76anti-parallel
Strand 5
B
100 104parallel
Strand 6
B
125 129parallel
Strand 7
B
164 166parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 172first strand
Strand 2
B
177 180anti-parallel
Strand 3
B
192 195anti-parallel
Strand 4
B
200 202anti-parallel
Strand 5
B
242 244parallel
Strand 6
B
251 252anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il