Analysis of interatomic Contacts of Structural Units in PDB entry:
5EWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EWU entry

There are 2 chains in PDB entry 5EWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 994ILE 1376
B
 ALA 995VAL 1372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5EWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
998 1020Right-handed alpha
Helix 2
AA2
A
1033 1041Right-handed alpha
Helix 3
AA3
A
1042 1053Right-handed alpha
Helix 4
AA4
A
1071 1076Right-handed alpha
Helix 5
AA5
A
1087 1094Right-handed alpha
Helix 6
AA6
A
1094 1110Right-handed alpha
Helix 7
AA7
A
1114 1117Right-handed 310
Helix 8
AA8
A
1118 1132Right-handed alpha
Helix 9
AA9
A
1134 1139Right-handed alpha
Helix 10
AB1
A
1153 1161Right-handed alpha
Helix 11
AB2
A
1165 1178Right-handed alpha
Helix 12
AB3
A
1185 1189Right-handed 310
Helix 13
AB4
A
1193 1203Right-handed alpha
Helix 14
AB5
A
1222 1228Right-handed alpha
Helix 15
AB6
A
1229 1237Right-handed alpha
Helix 16
AB7
A
1260 1271Right-handed alpha
Helix 17
AB8
A
1274 1284Right-handed alpha
Helix 18
AB9
A
1284 1307Right-handed alpha
Helix 19
AC1
A
1310 1322Right-handed alpha
Helix 20
AC2
A
1324 1335Right-handed alpha
Helix 21
AC3
A
1335 1352Right-handed alpha
Helix 22
AC4
A
1358 1376Right-handed alpha
Helix 23
AC5
B
998 1020Right-handed alpha
Helix 24
AC6
B
1033 1041Right-handed alpha
Helix 25
AC7
B
1042 1053Right-handed alpha
Helix 26
AC8
B
1071 1076Right-handed alpha
Helix 27
AC9
B
1087 1094Right-handed alpha
Helix 28
AD1
B
1094 1110Right-handed alpha
Helix 29
AD2
B
1114 1117Right-handed 310
Helix 30
AD3
B
1118 1132Right-handed alpha
Helix 31
AD4
B
1134 1139Right-handed alpha
Helix 32
AD5
B
1153 1161Right-handed alpha
Helix 33
AD6
B
1165 1177Right-handed alpha
Helix 34
AD7
B
1193 1203Right-handed alpha
Helix 35
AD8
B
1222 1227Right-handed alpha
Helix 36
AD9
B
1229 1237Right-handed alpha
Helix 37
AE1
B
1260 1271Right-handed alpha
Helix 38
AE2
B
1274 1283Right-handed alpha
Helix 39
AE3
B
1285 1307Right-handed alpha
Helix 40
AE4
B
1310 1322Right-handed alpha
Helix 41
AE5
B
1325 1335Right-handed alpha
Helix 42
AE6
B
1335 1352Right-handed alpha
Helix 43
AE7
B
1358 1372Right-handed alpha
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There are 4 sheets in PDB entry 5EWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1191 1192first strand
Strand 2
A
1179 1180anti-parallel
Strand 3
A
1142 1144anti-parallel
Strand 4
A
1081 1086parallel
Strand 5
A
1027 1032parallel
Strand 6
A
1206 1211parallel
Strand 7
A
1244 1249parallel
Strand 8
A
1256 1259anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1054 1058first strand
Strand 2
A
1064 1069anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1191 1192first strand
Strand 2
B
1179 1180anti-parallel
Strand 3
B
1142 1144anti-parallel
Strand 4
B
1081 1086parallel
Strand 5
B
1027 1032parallel
Strand 6
B
1206 1211parallel
Strand 7
B
1244 1249parallel
Strand 8
B
1256 1259anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1054 1058first strand
Strand 2
B
1064 1069anti-parallel
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