Analysis of interatomic Contacts of Structural Units in PDB entry:
5EXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EXB entry

There are 32 chains in PDB entry 5EXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 3LEU 61
A
ASN 65TRP 225
B
LEU 3LEU 61
B
ASN 65HIS 229
C
LEU 3LEU 61
C
ASN 65HIS 228
D
LEU 3LEU 61
D
ASN 65GLY 226
E
LEU 3LEU 61
E
ASN 65TRP 225
F
ASN 2LEU 61
F
ASN 65TRP 225
G
LEU 3LEU 61
G
ASN 65HIS 229
H
LEU 3LEU 61
H
ASN 65TRP 225
I
LEU 3LEU 61
I
ASN 65TRP 225
J
ASN 2LEU 61
J
ASN 65TRP 225
K
ASN 2LEU 61
K
ASN 65HIS 230
L
LEU 3LEU 61
L
ASN 65HIS 230
M
LEU 3LEU 61
M
ASN 65TRP 225
N
LEU 3LEU 61
N
ASN 65TRP 225
O
ASN 2LEU 61
O
ASN 65TRP 225
P
ASN 2LEU 61
P
ASN 65TRP 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5EXB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
53 61Right-handed 310
Helix 2
AA2
A
65 69Right-handed 310
Helix 3
AA3
A
79 83Right-handed 310
Helix 4
AA4
B
54 59Right-handed alpha
Helix 5
AA5
B
79 83Right-handed 310
Helix 6
AA6
C
54 59Right-handed alpha
Helix 7
AA7
C
77 82Right-handed alpha
Helix 8
AA8
D
53 57Right-handed 310
Helix 9
AA9
D
77 83Right-handed alpha
Helix 10
AB1
E
33 35Right-handed 310
Helix 11
AB2
E
53 58Right-handed 310
Helix 12
AB3
F
53 58Right-handed 310
Helix 13
AB4
F
77 83Right-handed alpha
Helix 14
AB5
G
54 59Right-handed alpha
Helix 15
AB6
G
77 83Right-handed alpha
Helix 16
AB7
G
129 134Right-handed alpha
Helix 17
AB8
H
54 59Right-handed alpha
Helix 18
AB9
H
77 82Right-handed alpha
Helix 19
AC1
I
53 58Right-handed 310
Helix 20
AC2
I
77 82Right-handed alpha
Helix 21
AC3
J
53 57Right-handed 310
Helix 22
AC4
J
77 83Right-handed alpha
Helix 23
AC5
K
33 35Right-handed 310
Helix 24
AC6
K
54 59Right-handed alpha
Helix 25
AC7
K
79 83Right-handed 310
Helix 26
AC8
L
54 59Right-handed alpha
Helix 27
AC9
L
77 82Right-handed alpha
Helix 28
AD1
M
54 59Right-handed alpha
Helix 29
AD2
M
79 83Right-handed 310
Helix 30
AD3
N
54 59Right-handed alpha
Helix 31
AD4
N
79 83Right-handed 310
Helix 32
AD5
O
54 59Right-handed alpha
Helix 33
AD6
P
53 57Right-handed 310
Helix 34
AD7
P
77 82Right-handed alpha
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There are 16 sheets in PDB entry 5EXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
136 139first strand
Strand 2
A
152 163anti-parallel
Strand 3
A
168 179anti-parallel
Strand 4
A
87 95anti-parallel
Strand 5
A
100 110anti-parallel
Strand 6
A
113 123anti-parallel
Strand 7
A
8 18parallel
Strand 8
A
21 31anti-parallel
Strand 9
A
38 46anti-parallel
Strand 10
A
206 216anti-parallel
Strand 11
A
189 200anti-parallel
Strand 12
A
142 149anti-parallel
Strand 13
A
152 163anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
136 139first strand
Strand 2
B
152 163anti-parallel
Strand 3
B
168 179anti-parallel
Strand 4
B
87 95anti-parallel
Strand 5
B
100 110anti-parallel
Strand 6
B
113 123anti-parallel
Strand 7
B
8 18parallel
Strand 8
B
21 32anti-parallel
Strand 9
B
37 46anti-parallel
Strand 10
B
206 216anti-parallel
Strand 11
B
189 200anti-parallel
Strand 12
B
142 149anti-parallel
Strand 13
B
152 163anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
136 139first strand
Strand 2
C
152 163anti-parallel
Strand 3
C
168 179anti-parallel
Strand 4
C
87 95anti-parallel
Strand 5
C
100 110anti-parallel
Strand 6
C
113 123anti-parallel
Strand 7
C
8 18parallel
Strand 8
C
21 32anti-parallel
Strand 9
C
37 46anti-parallel
Strand 10
C
206 216anti-parallel
Strand 11
C
189 200anti-parallel
Strand 12
C
142 149anti-parallel
Strand 13
C
152 163anti-parallel
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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
136 139first strand
Strand 2
D
152 163anti-parallel
Strand 3
D
168 179anti-parallel
Strand 4
D
87 95anti-parallel
Strand 5
D
100 110anti-parallel
Strand 6
D
113 123anti-parallel
Strand 7
D
8 18parallel
Strand 8
D
22 32anti-parallel
Strand 9
D
37 46anti-parallel
Strand 10
D
206 216anti-parallel
Strand 11
D
189 200anti-parallel
Strand 12
D
142 149anti-parallel
Strand 13
D
152 163anti-parallel
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There are 13 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
136 139first strand
Strand 2
E
152 163anti-parallel
Strand 3
E
168 179anti-parallel
Strand 4
E
87 95anti-parallel
Strand 5
E
100 110anti-parallel
Strand 6
E
113 123anti-parallel
Strand 7
E
8 18parallel
Strand 8
E
21 32anti-parallel
Strand 9
E
37 46anti-parallel
Strand 10
E
206 216anti-parallel
Strand 11
E
189 200anti-parallel
Strand 12
E
142 149anti-parallel
Strand 13
E
152 163anti-parallel
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There are 13 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
136 139first strand
Strand 2
F
152 163anti-parallel
Strand 3
F
168 179anti-parallel
Strand 4
F
87 95anti-parallel
Strand 5
F
100 110anti-parallel
Strand 6
F
113 123anti-parallel
Strand 7
F
8 18parallel
Strand 8
F
21 32anti-parallel
Strand 9
F
37 46anti-parallel
Strand 10
F
206 216anti-parallel
Strand 11
F
189 200anti-parallel
Strand 12
F
142 149anti-parallel
Strand 13
F
152 163anti-parallel
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There are 13 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
136 139first strand
Strand 2
G
152 163anti-parallel
Strand 3
G
168 179anti-parallel
Strand 4
G
87 95anti-parallel
Strand 5
G
100 110anti-parallel
Strand 6
G
113 123anti-parallel
Strand 7
G
8 18parallel
Strand 8
G
21 32anti-parallel
Strand 9
G
37 46anti-parallel
Strand 10
G
206 216anti-parallel
Strand 11
G
189 200anti-parallel
Strand 12
G
142 149anti-parallel
Strand 13
G
152 163anti-parallel
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There are 13 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
136 139first strand
Strand 2
H
152 163anti-parallel
Strand 3
H
168 179anti-parallel
Strand 4
H
87 95anti-parallel
Strand 5
H
100 110anti-parallel
Strand 6
H
113 123anti-parallel
Strand 7
H
8 18parallel
Strand 8
H
21 32anti-parallel
Strand 9
H
37 46anti-parallel
Strand 10
H
206 216anti-parallel
Strand 11
H
189 200anti-parallel
Strand 12
H
142 149anti-parallel
Strand 13
H
152 163anti-parallel
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There are 13 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
136 139first strand
Strand 2
I
152 163anti-parallel
Strand 3
I
168 179anti-parallel
Strand 4
I
87 95anti-parallel
Strand 5
I
100 110anti-parallel
Strand 6
I
113 123anti-parallel
Strand 7
I
8 18parallel
Strand 8
I
21 32anti-parallel
Strand 9
I
37 46anti-parallel
Strand 10
I
206 216anti-parallel
Strand 11
I
189 200anti-parallel
Strand 12
I
142 149anti-parallel
Strand 13
I
152 163anti-parallel
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There are 13 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
136 139first strand
Strand 2
J
152 163anti-parallel
Strand 3
J
168 179anti-parallel
Strand 4
J
87 95anti-parallel
Strand 5
J
100 110anti-parallel
Strand 6
J
113 123anti-parallel
Strand 7
J
8 18parallel
Strand 8
J
21 32anti-parallel
Strand 9
J
37 46anti-parallel
Strand 10
J
206 216anti-parallel
Strand 11
J
189 200anti-parallel
Strand 12
J
142 149anti-parallel
Strand 13
J
152 163anti-parallel
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There are 13 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
136 139first strand
Strand 2
K
152 163anti-parallel
Strand 3
K
168 179anti-parallel
Strand 4
K
87 95anti-parallel
Strand 5
K
100 110anti-parallel
Strand 6
K
113 123anti-parallel
Strand 7
K
8 18parallel
Strand 8
K
21 32anti-parallel
Strand 9
K
37 46anti-parallel
Strand 10
K
206 216anti-parallel
Strand 11
K
189 200anti-parallel
Strand 12
K
142 149anti-parallel
Strand 13
K
152 163anti-parallel
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There are 15 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
22 32first strand
Strand 2
L
37 38anti-parallel
Strand 3
L
206 216anti-parallel
Strand 4
L
22 32first strand
Strand 5
L
8 18anti-parallel
Strand 6
L
113 122parallel
Strand 7
L
100 110anti-parallel
Strand 8
L
87 95anti-parallel
Strand 9
L
168 179anti-parallel
Strand 10
L
152 163anti-parallel
Strand 11
L
136 149anti-parallel
Strand 12
L
189 199anti-parallel
Strand 13
L
206 216anti-parallel
Strand 14
L
41 46anti-parallel
Strand 15
L
206 216anti-parallel
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There are 13 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
136 139first strand
Strand 2
M
152 163anti-parallel
Strand 3
M
168 179anti-parallel
Strand 4
M
87 95anti-parallel
Strand 5
M
100 110anti-parallel
Strand 6
M
113 123anti-parallel
Strand 7
M
8 18parallel
Strand 8
M
21 32anti-parallel
Strand 9
M
37 46anti-parallel
Strand 10
M
206 216anti-parallel
Strand 11
M
189 200anti-parallel
Strand 12
M
142 149anti-parallel
Strand 13
M
152 163anti-parallel
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There are 13 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
136 139first strand
Strand 2
N
152 163anti-parallel
Strand 3
N
168 179anti-parallel
Strand 4
N
87 95anti-parallel
Strand 5
N
100 110anti-parallel
Strand 6
N
113 123anti-parallel
Strand 7
N
8 18parallel
Strand 8
N
21 32anti-parallel
Strand 9
N
37 46anti-parallel
Strand 10
N
206 216anti-parallel
Strand 11
N
189 200anti-parallel
Strand 12
N
142 149anti-parallel
Strand 13
N
152 163anti-parallel
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There are 13 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
136 139first strand
Strand 2
O
152 163anti-parallel
Strand 3
O
166 179anti-parallel
Strand 4
O
87 95anti-parallel
Strand 5
O
100 110anti-parallel
Strand 6
O
113 123anti-parallel
Strand 7
O
8 18parallel
Strand 8
O
21 32anti-parallel
Strand 9
O
37 46anti-parallel
Strand 10
O
206 216anti-parallel
Strand 11
O
189 200anti-parallel
Strand 12
O
142 149anti-parallel
Strand 13
O
152 163anti-parallel
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There are 13 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
136 139first strand
Strand 2
P
152 163anti-parallel
Strand 3
P
168 179anti-parallel
Strand 4
P
87 95anti-parallel
Strand 5
P
100 110anti-parallel
Strand 6
P
113 123anti-parallel
Strand 7
P
8 18parallel
Strand 8
P
21 32anti-parallel
Strand 9
P
37 46anti-parallel
Strand 10
P
206 216anti-parallel
Strand 11
P
189 200anti-parallel
Strand 12
P
142 149anti-parallel
Strand 13
P
152 163anti-parallel
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