Analysis of interatomic Contacts of Structural Units in PDB entry:
5EY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EY2 entry

There are 4 chains in PDB entry 5EY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LEU 256
B
 MSE 1LEU 256
D
 LEU 4LEU 256
C
 MSE 1LEU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5EY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
23 35Right-handed alpha
Helix 3
AA3
A
59 68Right-handed alpha
Helix 4
AA4
A
72 79Right-handed alpha
Helix 5
AA5
A
80 82Right-handed 310
Helix 6
AA6
A
136 179Right-handed alpha
Helix 7
AA7
A
180 195Right-handed alpha
Helix 8
AA8
A
213 227Right-handed alpha
Helix 9
AA9
A
248 254Right-handed alpha
Helix 10
AB1
B
3 16Right-handed alpha
Helix 11
AB2
B
23 35Right-handed alpha
Helix 12
AB3
B
61 66Right-handed alpha
Helix 13
AB4
B
72 79Right-handed alpha
Helix 14
AB5
B
136 177Right-handed alpha
Helix 15
AB6
B
180 195Right-handed alpha
Helix 16
AB7
B
213 227Right-handed alpha
Helix 17
AB8
B
248 254Right-handed alpha
Helix 18
AB9
D
5 15Right-handed alpha
Helix 19
AC1
D
24 35Right-handed alpha
Helix 20
AC2
D
72 81Right-handed alpha
Helix 21
AC3
D
136 178Right-handed alpha
Helix 22
AC4
D
180 195Right-handed alpha
Helix 23
AC5
D
204 210Right-handed 310
Helix 24
AC6
D
214 226Right-handed alpha
Helix 25
AC7
D
248 253Right-handed alpha
Helix 26
AC8
C
3 15Right-handed alpha
Helix 27
AC9
C
25 35Right-handed alpha
Helix 28
AD1
C
139 178Right-handed alpha
Helix 29
AD2
C
180 194Right-handed alpha
Helix 30
AD3
C
202 211Right-handed alpha
Helix 31
AD4
C
213 227Right-handed alpha
Helix 32
AD5
C
236 238Right-handed 310
Helix 33
AD6
C
248 254Right-handed alpha
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There are 8 sheets in PDB entry 5EY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
38 43anti-parallel
Strand 3
A
122 130anti-parallel
Strand 4
A
110 117anti-parallel
Strand 5
A
86 89anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
241 244anti-parallel
Strand 3
A
230 233anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
38 43anti-parallel
Strand 3
B
121 130anti-parallel
Strand 4
B
110 118anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 200first strand
Strand 2
B
241 243anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
50 53first strand
Strand 2
D
38 42anti-parallel
Strand 3
D
125 129anti-parallel
Strand 4
D
112 115anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 201first strand
Strand 2
D
240 243anti-parallel
Strand 3
D
233 234anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 52first strand
Strand 2
C
38 42anti-parallel
Strand 3
C
125 131anti-parallel
Strand 4
C
109 115anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 201first strand
Strand 2
C
240 244anti-parallel
Strand 3
C
230 234anti-parallel
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