Analysis of interatomic Contacts of Structural Units in PDB entry:
5EY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EY7 entry

There are 2 chains in PDB entry 5EY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17GLU 323
B
 SER 17GLY 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5EY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 57Right-handed alpha
Helix 2
AA2
A
70 82Right-handed alpha
Helix 3
AA3
A
120 125Right-handed 310
Helix 4
AA4
A
126 130Right-handed 310
Helix 5
AA5
A
144 147Right-handed 310
Helix 6
AA6
A
150 166Right-handed alpha
Helix 7
AA7
A
176 180Right-handed 310
Helix 8
AA8
A
182 184Right-handed 310
Helix 9
AA9
A
185 195Right-handed alpha
Helix 10
AB1
A
203 212Right-handed alpha
Helix 11
AB2
A
215 223Right-handed alpha
Helix 12
AB3
A
224 227Right-handed 310
Helix 13
AB4
A
263 278Right-handed alpha
Helix 14
AB5
A
284 302Right-handed alpha
Helix 15
AB6
A
303 305Right-handed 310
Helix 16
AB7
A
314 323Right-handed alpha
Helix 17
AB8
B
45 57Right-handed alpha
Helix 18
AB9
B
70 83Right-handed alpha
Helix 19
AC1
B
120 125Right-handed 310
Helix 20
AC2
B
126 130Right-handed 310
Helix 21
AC3
B
144 147Right-handed 310
Helix 22
AC4
B
150 165Right-handed alpha
Helix 23
AC5
B
176 180Right-handed 310
Helix 24
AC6
B
182 184Right-handed 310
Helix 25
AC7
B
185 196Right-handed alpha
Helix 26
AC8
B
203 210Right-handed alpha
Helix 27
AC9
B
215 223Right-handed alpha
Helix 28
AD1
B
224 227Right-handed 310
Helix 29
AD2
B
264 279Right-handed alpha
Helix 30
AD3
B
284 304Right-handed alpha
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There are 3 sheets in PDB entry 5EY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 93first strand
Strand 2
A
61 68parallel
Strand 3
A
21 24parallel
Strand 4
A
138 142parallel
Strand 5
A
168 172parallel
Strand 6
A
199 202parallel
Strand 7
A
230 234parallel
Strand 8
A
240 243anti-parallel
Strand 9
A
248 251anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 115first strand
Strand 2
A
100 106anti-parallel
Strand 3
A
28 33parallel
Strand 4
A
38 44anti-parallel
Strand 5
B
38 44anti-parallel
Strand 6
B
28 33anti-parallel
Strand 7
B
100 105parallel
Strand 8
B
111 115anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 93first strand
Strand 2
B
61 68parallel
Strand 3
B
21 23parallel
Strand 4
B
138 142parallel
Strand 5
B
168 172parallel
Strand 6
B
199 202parallel
Strand 7
B
230 234parallel
Strand 8
B
240 243anti-parallel
Strand 9
B
248 250anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il