Analysis of interatomic Contacts of Structural Units in PDB entry:
5EYW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EYW entry

There are 2 chains in PDB entry 5EYW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ARG 248
B
 ARG 5ARG 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5EYW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 32Right-handed alpha
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
48 56Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
96 102Right-handed alpha
Helix 6
AA6
A
106 121Right-handed alpha
Helix 7
AA7
A
131 137Right-handed alpha
Helix 8
AA8
A
139 152Right-handed alpha
Helix 9
AA9
A
153 155Right-handed 310
Helix 10
AB1
A
157 160Right-handed 310
Helix 11
AB2
A
167 171Right-handed 310
Helix 12
AB3
A
178 197Right-handed alpha
Helix 13
AB4
A
198 205Right-handed alpha
Helix 14
AB5
A
217 223Right-handed alpha
Helix 15
AB6
A
233 239Right-handed 310
Helix 16
AB7
A
240 246Right-handed alpha
Helix 17
AB8
B
18 32Right-handed alpha
Helix 18
AB9
B
45 47Right-handed 310
Helix 19
AC1
B
48 56Right-handed alpha
Helix 20
AC2
B
80 87Right-handed alpha
Helix 21
AC3
B
96 102Right-handed alpha
Helix 22
AC4
B
106 120Right-handed alpha
Helix 23
AC5
B
131 137Right-handed alpha
Helix 24
AC6
B
139 152Right-handed alpha
Helix 25
AC7
B
153 155Right-handed 310
Helix 26
AC8
B
157 161Right-handed 310
Helix 27
AC9
B
167 171Right-handed 310
Helix 28
AD1
B
178 197Right-handed alpha
Helix 29
AD2
B
198 205Right-handed alpha
Helix 30
AD3
B
217 223Right-handed alpha
Helix 31
AD4
B
233 239Right-handed 310
Helix 32
AD5
B
240 246Right-handed alpha
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There are 2 sheets in PDB entry 5EYW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
38 43parallel
Strand 3
A
61 64parallel
Strand 4
A
91 94parallel
Strand 5
A
123 128parallel
Strand 6
A
162 165parallel
Strand 7
A
206 210parallel
Strand 8
A
229 232parallel
Strand 9
A
7 12parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 12first strand
Strand 2
B
38 43parallel
Strand 3
B
61 64parallel
Strand 4
B
91 94parallel
Strand 5
B
123 128parallel
Strand 6
B
163 165parallel
Strand 7
B
207 210parallel
Strand 8
B
229 232parallel
Strand 9
B
7 12parallel
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