Analysis of interatomic Contacts of Structural Units in PDB entry:
5EZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EZ1 entry

There are 2 chains in PDB entry 5EZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 54VAL 296
B
 THR 54ILE 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5EZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 98Right-handed alpha
Helix 2
AA2
A
99 102Right-handed 310
Helix 3
AA3
A
103 131Right-handed alpha
Helix 4
AA4
A
136 152Right-handed alpha
Helix 5
AA5
A
166 179Right-handed alpha
Helix 6
AA6
A
181 183Right-handed 310
Helix 7
AA7
A
184 197Right-handed alpha
Helix 8
AA8
A
199 206Right-handed alpha
Helix 9
AA9
A
220 230Right-handed alpha
Helix 10
AB1
A
261 292Right-handed alpha
Helix 11
AB2
B
76 98Right-handed alpha
Helix 12
AB3
B
99 102Right-handed 310
Helix 13
AB4
B
103 131Right-handed alpha
Helix 14
AB5
B
136 152Right-handed alpha
Helix 15
AB6
B
166 179Right-handed alpha
Helix 16
AB7
B
181 197Right-handed alpha
Helix 17
AB8
B
199 206Right-handed alpha
Helix 18
AB9
B
220 230Right-handed alpha
Helix 19
AC1
B
261 292Right-handed alpha
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There are 6 sheets in PDB entry 5EZ1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
55 56anti-parallel
Strand 3
B
295 296anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 154first strand
Strand 2
A
258 259anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 214first strand
Strand 2
A
157 164anti-parallel
Strand 3
A
245 254anti-parallel
Strand 4
A
240 242anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
59 60anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 154first strand
Strand 2
B
258 259anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 215first strand
Strand 2
B
156 164anti-parallel
Strand 3
B
245 254anti-parallel
Strand 4
B
240 242anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il