Analysis of interatomic Contacts of Structural Units in PDB entry:
5EZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EZB entry

There are 2 chains in PDB entry 5EZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 513GLY 730
B
 GLN 513GLY 730
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5EZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
554 567Right-handed alpha
Helix 2
AA2
A
668 685Right-handed alpha
Helix 3
AA3
A
695 705Right-handed alpha
Helix 4
AA4
A
713 715Right-handed 310
Helix 5
AA5
A
720 730Right-handed alpha
Helix 6
AA6
B
554 567Right-handed alpha
Helix 7
AA7
B
668 685Right-handed alpha
Helix 8
AA8
B
695 705Right-handed alpha
Helix 9
AA9
B
713 715Right-handed 310
Helix 10
AB1
B
720 730Right-handed alpha
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There are 4 sheets in PDB entry 5EZB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 528first strand
Strand 2
A
515 519anti-parallel
Strand 3
A
541 545anti-parallel
Strand 4
A
656 660parallel
Strand 5
A
688 692parallel
Strand 6
A
717 718parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 550first strand
Strand 2
A
666 667parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
526 528first strand
Strand 2
B
515 519anti-parallel
Strand 3
B
541 545anti-parallel
Strand 4
B
656 660parallel
Strand 5
B
688 692parallel
Strand 6
B
717 718parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
549 550first strand
Strand 2
B
666 667parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il