Analysis of interatomic Contacts of Structural Units in PDB entry:
5EZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5EZM entry

There is 1 chain in PDB entry 5EZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 25GLN 575
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5EZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 45Right-handed alpha
Helix 2
AA2
A
46 48Right-handed 310
Helix 3
AA3
A
54 70Right-handed alpha
Helix 4
AA4
A
87 101Right-handed alpha
Helix 5
AA5
A
103 108Right-handed alpha
Helix 6
AA6
A
108 131Right-handed alpha
Helix 7
AA7
A
131 145Right-handed alpha
Helix 8
AA8
A
145 153Right-handed alpha
Helix 9
AA9
A
156 176Right-handed alpha
Helix 10
AB1
A
181 204Right-handed alpha
Helix 11
AB2
A
205 222Right-handed alpha
Helix 12
AB3
A
226 231Right-handed alpha
Helix 13
AB4
A
232 255Right-handed alpha
Helix 14
AB5
A
257 265Right-handed alpha
Helix 15
AB6
A
284 293Right-handed alpha
Helix 16
AB7
A
294 298Right-handed 310
Helix 17
AB8
A
299 308Right-handed alpha
Helix 18
AB9
A
319 337Right-handed alpha
Helix 19
AC1
A
342 347Right-handed 310
Helix 20
AC2
A
348 363Right-handed alpha
Helix 21
AC3
A
365 387Right-handed alpha
Helix 22
AC4
A
388 393Right-handed 310
Helix 23
AC5
A
399 428Right-handed alpha
Helix 24
AC6
A
431 454Right-handed alpha
Helix 25
AC7
A
454 463Right-handed alpha
Helix 26
AC8
A
466 472Right-handed alpha
Helix 27
AC9
A
489 495Right-handed alpha
Helix 28
AD1
A
504 506Right-handed 310
Helix 29
AD2
A
507 514Right-handed alpha
Helix 30
AD3
A
515 518Right-handed 310
Helix 31
AD4
A
521 532Right-handed alpha
Helix 32
AD5
A
540 548Right-handed alpha
Helix 33
AD6
A
568 572Right-handed 310
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There are 2 sheets in PDB entry 5EZM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
80 81anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 501first strand
Strand 2
A
480 483parallel
Strand 3
A
536 539parallel
Strand 4
A
563 566anti-parallel
Strand 5
A
554 558anti-parallel
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