Analysis of interatomic Contacts of Structural Units in PDB entry:
5F06


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5F06 entry

There are 2 chains in PDB entry 5F06 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2PHE 214
B
 VAL 2PHE 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5F06. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
38 41Right-handed 310
Helix 3
AA3
A
42 47Right-handed alpha
Helix 4
AA4
A
66 78Right-handed alpha
Helix 5
AA5
A
90 107Right-handed alpha
Helix 6
AA6
A
108 121Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
130 155Right-handed alpha
Helix 9
AA9
A
164 169Right-handed alpha
Helix 10
AB1
A
170 178Right-handed alpha
Helix 11
AB2
A
179 182Right-handed 310
Helix 12
AB3
A
183 188Right-handed alpha
Helix 13
AB4
A
189 200Right-handed alpha
Helix 14
AB5
A
202 212Right-handed alpha
Helix 15
AB6
B
11 24Right-handed alpha
Helix 16
AB7
B
38 41Right-handed 310
Helix 17
AB8
B
42 47Right-handed alpha
Helix 18
AB9
B
66 78Right-handed alpha
Helix 19
AC1
B
90 107Right-handed alpha
Helix 20
AC2
B
107 121Right-handed alpha
Helix 21
AC3
B
122 126Right-handed 310
Helix 22
AC4
B
130 155Right-handed alpha
Helix 23
AC5
B
164 169Right-handed alpha
Helix 24
AC6
B
170 178Right-handed alpha
Helix 25
AC7
B
179 182Right-handed 310
Helix 26
AC8
B
183 188Right-handed alpha
Helix 27
AC9
B
189 200Right-handed alpha
Helix 28
AD1
B
202 210Right-handed alpha
Helix 29
AD2
B
211 213Right-handed 310
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There are 2 sheets in PDB entry 5F06. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
3 7parallel
Strand 3
A
56 59anti-parallel
Strand 4
A
62 65anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 32first strand
Strand 2
B
4 7parallel
Strand 3
B
56 59anti-parallel
Strand 4
B
62 65anti-parallel
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